Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD3Q7Z3D4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 AL353779.1-201ENST00000434793 351 ntBASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 FAM86LP-201ENST00000478302 853 ntBASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 AC099568.2-201ENST00000609194 695 ntBASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 MIR8072-201ENST00000614241 80 ntBASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LYSMD3Q7Z3D4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 AC112693.3-201ENST00000624819 1983 ntBASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 RRP7BP-205ENST00000566851 833 ntBASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 SPDYE22P-201ENST00000582158 798 ntBASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 AC007431.3-201ENST00000623221 587 ntBASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 C18orf15-201ENST00000623680 2534 ntBASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 AL391825.1-201ENST00000457671 1364 ntBASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LYSMD3Q7Z3D4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.58■□□□□ 0.09
LYSMD3Q7Z3D4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
LYSMD3Q7Z3D4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LYSMD3Q7Z3D4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
LYSMD3Q7Z3D4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms