Protein–RNA interactions for Protein: Q6XYD6

BRD3OS, BRD3 opposite strand, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3OSQ6XYD6 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 AC022188.1-201ENST00000620960 1664 ntBASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 AC008741.2-201ENST00000612792 3115 ntBASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 CSF2RBP1-201ENST00000447905 391 ntBASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 BX539320.1-201ENST00000623759 877 ntBASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
BRD3OSQ6XYD6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 AC126755.1-201ENST00000525846 6405 ntBASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 ACKR1-201ENST00000368121 1240 ntBASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 GAPDHP40-201ENST00000505218 1006 ntBASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 RN7SL219P-201ENST00000582872 296 ntBASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
BRD3OSQ6XYD6 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms