Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 KRT18P1-202ENST00000452408 1331 ntBASIC12.1□□□□□ -0.47
KCNIP4Q6PIL6 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
KCNIP4Q6PIL6 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP4Q6PIL6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.1□□□□□ -0.47
KCNIP4Q6PIL6 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
KCNIP4Q6PIL6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.1□□□□□ -0.47
KCNIP4Q6PIL6 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.1□□□□□ -0.47
KCNIP4Q6PIL6 PPT1-213ENST00000641319 2388 ntBASIC12.1□□□□□ -0.47
KCNIP4Q6PIL6 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 PTPRVP-205ENST00000641549 5067 ntBASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 LINC00982-205ENST00000420957 435 ntBASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 AL020989.1-201ENST00000422979 469 ntBASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 AL645939.2-201ENST00000427340 991 ntBASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 AC246785.2-201ENST00000432512 513 ntBASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 ABR-217ENST00000572441 563 ntTSL 4 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 MST1P2-201ENST00000457982 2291 ntBASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 AC089987.1-201ENST00000551654 2209 ntBASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
KCNIP4Q6PIL6 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
KCNIP4Q6PIL6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.08□□□□□ -0.47
KCNIP4Q6PIL6 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.08□□□□□ -0.47
KCNIP4Q6PIL6 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.08□□□□□ -0.47
KCNIP4Q6PIL6 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
KCNIP4Q6PIL6 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
KCNIP4Q6PIL6 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
KCNIP4Q6PIL6 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP4Q6PIL6 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.08□□□□□ -0.48
KCNIP4Q6PIL6 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP4Q6PIL6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP4Q6PIL6 AC152010.1-201ENST00000415779 2006 ntBASIC12.08□□□□□ -0.48
KCNIP4Q6PIL6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC12.08□□□□□ -0.48
KCNIP4Q6PIL6 IER3-202ENST00000376377 1350 ntBASIC12.08□□□□□ -0.48
KCNIP4Q6PIL6 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP4Q6PIL6 WASH3P-207ENST00000560956 1394 ntBASIC12.08□□□□□ -0.48
KCNIP4Q6PIL6 FO538757.1-201ENST00000623083 1397 ntBASIC12.08□□□□□ -0.48
KCNIP4Q6PIL6 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP4Q6PIL6 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
KCNIP4Q6PIL6 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP4Q6PIL6 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
KCNIP4Q6PIL6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.08□□□□□ -0.48
KCNIP4Q6PIL6 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP4Q6PIL6 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP4Q6PIL6 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.08□□□□□ -0.48
KCNIP4Q6PIL6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP4Q6PIL6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC12.08□□□□□ -0.48
KCNIP4Q6PIL6 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP4Q6PIL6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms