Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.17□□□□□ -0.14
NIPAL3Q6P499 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 AC232323.1-201ENST00000540724 2099 ntBASIC14.16□□□□□ -0.14
NIPAL3Q6P499 REXO1L5P-201ENST00000622260 2098 ntBASIC14.16□□□□□ -0.14
NIPAL3Q6P499 AC026748.1-201ENST00000624349 3251 ntBASIC14.16□□□□□ -0.14
NIPAL3Q6P499 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 AZGP1P1-201ENST00000411909 902 ntBASIC14.16□□□□□ -0.14
NIPAL3Q6P499 RPL37AP1-201ENST00000412502 279 ntBASIC14.16□□□□□ -0.14
NIPAL3Q6P499 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 PHKG1P2-201ENST00000457537 863 ntBASIC14.16□□□□□ -0.14
NIPAL3Q6P499 SERBP1P3-201ENST00000459980 809 ntBASIC14.16□□□□□ -0.14
NIPAL3Q6P499 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 LINC00552-201ENST00000625151 2579 ntBASIC14.16□□□□□ -0.14
NIPAL3Q6P499 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NIPAL3Q6P499 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 AL080243.2-201ENST00000418783 582 ntBASIC14.15□□□□□ -0.14
NIPAL3Q6P499 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 HNRNPUP1-201ENST00000554987 333 ntBASIC14.15□□□□□ -0.14
NIPAL3Q6P499 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 AL158211.3-201ENST00000607385 239 ntBASIC14.15□□□□□ -0.14
NIPAL3Q6P499 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NIPAL3Q6P499 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms