Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 AC113367.3-201ENST00000508316 1912 ntBASIC11.78□□□□□ -0.52
MRPL54Q6P161 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
MRPL54Q6P161 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11.78□□□□□ -0.52
MRPL54Q6P161 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
MRPL54Q6P161 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC11.78□□□□□ -0.52
MRPL54Q6P161 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC11.78□□□□□ -0.52
MRPL54Q6P161 TSPY5P-201ENST00000426936 936 ntBASIC11.78□□□□□ -0.52
MRPL54Q6P161 ABCD1P5-201ENST00000445663 754 ntBASIC11.78□□□□□ -0.52
MRPL54Q6P161 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC11.78□□□□□ -0.52
MRPL54Q6P161 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC11.78□□□□□ -0.52
MRPL54Q6P161 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 AC011498.5-201ENST00000592027 486 ntBASIC11.78□□□□□ -0.52
MRPL54Q6P161 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
MRPL54Q6P161 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 Z82170.1-201ENST00000625081 3192 ntBASIC11.78□□□□□ -0.52
MRPL54Q6P161 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
MRPL54Q6P161 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC11.78□□□□□ -0.52
MRPL54Q6P161 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
MRPL54Q6P161 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
MRPL54Q6P161 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC11.78□□□□□ -0.52
MRPL54Q6P161 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.78□□□□□ -0.52
MRPL54Q6P161 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
MRPL54Q6P161 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
MRPL54Q6P161 SLC9A7P1-202ENST00000556476 2239 ntBASIC11.78□□□□□ -0.52
MRPL54Q6P161 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC11.78□□□□□ -0.52
MRPL54Q6P161 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 FP325330.2-201ENST00000624219 5630 ntBASIC11.78□□□□□ -0.52
MRPL54Q6P161 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 ACE3P-201ENST00000423435 1973 ntBASIC11.78□□□□□ -0.52
MRPL54Q6P161 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
MRPL54Q6P161 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
MRPL54Q6P161 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
MRPL54Q6P161 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
MRPL54Q6P161 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
MRPL54Q6P161 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
MRPL54Q6P161 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC11.77□□□□□ -0.52
MRPL54Q6P161 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
MRPL54Q6P161 AC027612.1-201ENST00000445234 2395 ntBASIC11.77□□□□□ -0.52
MRPL54Q6P161 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
MRPL54Q6P161 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
MRPL54Q6P161 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
MRPL54Q6P161 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
MRPL54Q6P161 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
MRPL54Q6P161 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
MRPL54Q6P161 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
MRPL54Q6P161 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC11.77□□□□□ -0.53
MRPL54Q6P161 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
MRPL54Q6P161 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
MRPL54Q6P161 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
MRPL54Q6P161 CD99-202ENST00000381180 530 ntTSL 2 BASIC11.77□□□□□ -0.53
MRPL54Q6P161 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
MRPL54Q6P161 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC11.77□□□□□ -0.53
MRPL54Q6P161 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC11.77□□□□□ -0.53
MRPL54Q6P161 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
MRPL54Q6P161 THAP5-204ENST00000438865 868 ntTSL 2 BASIC11.77□□□□□ -0.53
MRPL54Q6P161 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC11.77□□□□□ -0.53
MRPL54Q6P161 AC092647.4-201ENST00000457211 535 ntBASIC11.77□□□□□ -0.53
MRPL54Q6P161 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
MRPL54Q6P161 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC11.77□□□□□ -0.53
MRPL54Q6P161 KRT8P26-201ENST00000534154 1276 ntBASIC11.77□□□□□ -0.53
MRPL54Q6P161 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11.77□□□□□ -0.53
MRPL54Q6P161 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11.77□□□□□ -0.53
MRPL54Q6P161 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
MRPL54Q6P161 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC11.77□□□□□ -0.53
MRPL54Q6P161 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC11.77□□□□□ -0.53
MRPL54Q6P161 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC11.77□□□□□ -0.53
MRPL54Q6P161 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
MRPL54Q6P161 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
MRPL54Q6P161 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
MRPL54Q6P161 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms