Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.19■□□□□ 0.18
TTC39BQ5VTQ0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TTC39BQ5VTQ0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TTC39BQ5VTQ0 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TTC39BQ5VTQ0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.19■□□□□ 0.18
TTC39BQ5VTQ0 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.19■□□□□ 0.18
TTC39BQ5VTQ0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TTC39BQ5VTQ0 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TTC39BQ5VTQ0 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TTC39BQ5VTQ0 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TTC39BQ5VTQ0 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
TTC39BQ5VTQ0 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.19■□□□□ 0.18
TTC39BQ5VTQ0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 AC090616.6-203ENST00000579186 1945 ntBASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 AL133267.1-201ENST00000398220 340 ntBASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 KRT18P64-201ENST00000434946 1219 ntBASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TTC39BQ5VTQ0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 AC104596.2-201ENST00000512793 793 ntBASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 AC007431.3-201ENST00000623221 587 ntBASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 AC025048.6-201ENST00000634326 1161 ntBASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TTC39BQ5VTQ0 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.16■□□□□ 0.18
TTC39BQ5VTQ0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms