Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 RPL7P3-201ENST00000441388 714 ntBASIC21.24■□□□□ 0.99
CDCA8Q53HL2 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 KLF2P4-201ENST00000451959 1225 ntBASIC21.24■□□□□ 0.99
CDCA8Q53HL2 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 AC104989.1-201ENST00000519711 778 ntBASIC21.24■□□□□ 0.99
CDCA8Q53HL2 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 API5-202ENST00000420461 2009 ntTSL 2 BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 LRRC59-203ENST00000576448 1531 ntBASIC21.24■□□□□ 0.99
CDCA8Q53HL2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
CDCA8Q53HL2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 AGK-211ENST00000629555 2765 ntTSL 5 BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 AC244107.1-201ENST00000442033 332 ntBASIC21.23■□□□□ 0.99
CDCA8Q53HL2 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 AC022616.1-201ENST00000518688 554 ntBASIC21.23■□□□□ 0.99
CDCA8Q53HL2 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 RN7SL48P-201ENST00000579283 293 ntBASIC21.23■□□□□ 0.99
CDCA8Q53HL2 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 LARP4-220ENST00000615080 856 ntTSL 5 BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 AL360270.3-201ENST00000609118 1348 ntBASIC21.23■□□□□ 0.99
CDCA8Q53HL2 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDCA8Q53HL2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC21.22■□□□□ 0.99
CDCA8Q53HL2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC21.22■□□□□ 0.99
CDCA8Q53HL2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CDCA8Q53HL2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDCA8Q53HL2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC21.22■□□□□ 0.99
CDCA8Q53HL2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC21.22■□□□□ 0.99
CDCA8Q53HL2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDCA8Q53HL2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC21.22■□□□□ 0.99
CDCA8Q53HL2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC21.22■□□□□ 0.99
CDCA8Q53HL2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDCA8Q53HL2 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDCA8Q53HL2 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDCA8Q53HL2 ZBTB12BP-201ENST00000314232 1122 ntBASIC21.22■□□□□ 0.99
CDCA8Q53HL2 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDCA8Q53HL2 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC21.22■□□□□ 0.99
CDCA8Q53HL2 KRT90P-201ENST00000549264 1064 ntBASIC21.22■□□□□ 0.99
CDCA8Q53HL2 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CDCA8Q53HL2 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CDCA8Q53HL2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDCA8Q53HL2 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDCA8Q53HL2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDCA8Q53HL2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDCA8Q53HL2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDCA8Q53HL2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CDCA8Q53HL2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDCA8Q53HL2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDCA8Q53HL2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC21.21■□□□□ 0.99
CDCA8Q53HL2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDCA8Q53HL2 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CDCA8Q53HL2 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC21.21■□□□□ 0.99
CDCA8Q53HL2 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms