Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CCDC58Q4VC31 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC58Q4VC31 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CCDC58Q4VC31 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC58Q4VC31 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CCDC58Q4VC31 AC009947.1-201ENST00000444350 727 ntBASIC13.96□□□□□ -0.17
CCDC58Q4VC31 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.96□□□□□ -0.17
CCDC58Q4VC31 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CCDC58Q4VC31 AL450472.2-201ENST00000603663 1156 ntBASIC13.96□□□□□ -0.17
CCDC58Q4VC31 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.96□□□□□ -0.17
CCDC58Q4VC31 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.96□□□□□ -0.17
CCDC58Q4VC31 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CCDC58Q4VC31 SPTSSB-204ENST00000617024 1292 ntBASIC13.96□□□□□ -0.17
CCDC58Q4VC31 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.96□□□□□ -0.17
CCDC58Q4VC31 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.96□□□□□ -0.17
CCDC58Q4VC31 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.96□□□□□ -0.17
CCDC58Q4VC31 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC58Q4VC31 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CCDC58Q4VC31 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC58Q4VC31 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC58Q4VC31 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CCDC58Q4VC31 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CCDC58Q4VC31 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CCDC58Q4VC31 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CCDC58Q4VC31 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.96□□□□□ -0.18
CCDC58Q4VC31 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCDC58Q4VC31 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCDC58Q4VC31 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CCDC58Q4VC31 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.96□□□□□ -0.18
CCDC58Q4VC31 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCDC58Q4VC31 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCDC58Q4VC31 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CCDC58Q4VC31 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.96□□□□□ -0.18
CCDC58Q4VC31 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.96□□□□□ -0.18
CCDC58Q4VC31 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.95□□□□□ -0.18
CCDC58Q4VC31 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 RPS8P6-201ENST00000426177 609 ntBASIC13.95□□□□□ -0.18
CCDC58Q4VC31 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 AC105233.2-201ENST00000523697 349 ntBASIC13.95□□□□□ -0.18
CCDC58Q4VC31 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 AF228730.5-201ENST00000530288 346 ntBASIC13.95□□□□□ -0.18
CCDC58Q4VC31 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CCDC58Q4VC31 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms