Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 UPF3AP2-201ENST00000457924 1132 ntBASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 RPSAP36-202ENST00000494591 1261 ntBASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 MIR4741-201ENST00000579822 90 ntBASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 AC093813.1-201ENST00000605066 256 ntBASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 DRD5P1-201ENST00000456605 1438 ntBASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 AC136604.1-201ENST00000418535 575 ntBASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 NUS1P3-201ENST00000423502 862 ntBASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 MPRIPP1-201ENST00000452433 1089 ntBASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 EIF4HP1-201ENST00000453115 687 ntBASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 HIST2H2BC-201ENST00000498492 580 ntBASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 AC104982.3-201ENST00000581995 514 ntBASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 AC020914.3-201ENST00000594712 304 ntBASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 Z99916.3-201ENST00000623422 1080 ntBASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 AC132938.4-201ENST00000623835 848 ntBASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 KRT8P19-201ENST00000551916 1455 ntBASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.54■□□□□ 0.24
CTC1Q2NKJ3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTC1Q2NKJ3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms