Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 CD8B2-202ENST00000417670 633 ntBASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 ACTG1P17-201ENST00000558391 1119 ntBASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 AC084346.2-201ENST00000607097 949 ntBASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 AC008741.2-201ENST00000612792 3115 ntBASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 AC011270.2-201ENST00000624293 2550 ntBASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 AC015818.8-201ENST00000587907 1519 ntBASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 AC008894.3-201ENST00000624324 3103 ntBASIC17.92■□□□□ 0.46
SHROOM1Q2M3G4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 AL365203.3-201ENST00000609742 2057 ntBASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 KRT8P13-201ENST00000463294 1010 ntBASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 OR10B1P-201ENST00000601666 907 ntBASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 AL022328.3-201ENST00000607943 679 ntBASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 AL021578.1-201ENST00000613646 709 ntBASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHROOM1Q2M3G4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHROOM1Q2M3G4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms