Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFX1Q12986 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.03■□□□□ 0.32
NFX1Q12986 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.03■□□□□ 0.32
NFX1Q12986 ACKR1-201ENST00000368121 1240 ntBASIC17.03■□□□□ 0.32
NFX1Q12986 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.03■□□□□ 0.32
NFX1Q12986 MIR1908-201ENST00000410394 80 ntBASIC17.03■□□□□ 0.32
NFX1Q12986 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.03■□□□□ 0.32
NFX1Q12986 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.03■□□□□ 0.32
NFX1Q12986 C2orf27AP3-201ENST00000434123 579 ntBASIC17.03■□□□□ 0.32
NFX1Q12986 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.03■□□□□ 0.32
NFX1Q12986 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NFX1Q12986 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NFX1Q12986 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFX1Q12986 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.03■□□□□ 0.32
NFX1Q12986 AC022137.2-201ENST00000503482 481 ntBASIC17.03■□□□□ 0.32
NFX1Q12986 RNA5SP412-201ENST00000516234 123 ntBASIC17.03■□□□□ 0.32
NFX1Q12986 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.03■□□□□ 0.32
NFX1Q12986 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.03■□□□□ 0.32
NFX1Q12986 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.03■□□□□ 0.32
NFX1Q12986 AL354718.3-201ENST00000616414 581 ntBASIC17.03■□□□□ 0.32
NFX1Q12986 CR382287.1-201ENST00000623954 586 ntBASIC17.03■□□□□ 0.32
NFX1Q12986 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.03■□□□□ 0.32
NFX1Q12986 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.03■□□□□ 0.32
NFX1Q12986 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
NFX1Q12986 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFX1Q12986 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFX1Q12986 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
NFX1Q12986 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFX1Q12986 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
NFX1Q12986 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFX1Q12986 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFX1Q12986 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NFX1Q12986 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFX1Q12986 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFX1Q12986 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NFX1Q12986 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NFX1Q12986 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.03■□□□□ 0.32
NFX1Q12986 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NFX1Q12986 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.02■□□□□ 0.32
NFX1Q12986 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NFX1Q12986 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
NFX1Q12986 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NFX1Q12986 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NFX1Q12986 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NFX1Q12986 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.02■□□□□ 0.32
NFX1Q12986 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
NFX1Q12986 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
NFX1Q12986 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
NFX1Q12986 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NFX1Q12986 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NFX1Q12986 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NFX1Q12986 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.02■□□□□ 0.32
NFX1Q12986 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.02■□□□□ 0.32
NFX1Q12986 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.02■□□□□ 0.32
NFX1Q12986 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NFX1Q12986 FAM8A2P-201ENST00000528813 1142 ntBASIC17.02■□□□□ 0.32
NFX1Q12986 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.02■□□□□ 0.32
NFX1Q12986 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.02■□□□□ 0.32
NFX1Q12986 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.02■□□□□ 0.32
NFX1Q12986 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.02■□□□□ 0.32
NFX1Q12986 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.02■□□□□ 0.32
NFX1Q12986 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.02■□□□□ 0.32
NFX1Q12986 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NFX1Q12986 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NFX1Q12986 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NFX1Q12986 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
NFX1Q12986 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.02■□□□□ 0.31
NFX1Q12986 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
NFX1Q12986 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NFX1Q12986 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NFX1Q12986 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFX1Q12986 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFX1Q12986 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFX1Q12986 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFX1Q12986 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFX1Q12986 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NFX1Q12986 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFX1Q12986 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NFX1Q12986 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
NFX1Q12986 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.01■□□□□ 0.31
NFX1Q12986 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.01■□□□□ 0.31
NFX1Q12986 AL355994.2-201ENST00000447882 704 ntBASIC17.01■□□□□ 0.31
NFX1Q12986 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.01■□□□□ 0.31
NFX1Q12986 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.01■□□□□ 0.31
NFX1Q12986 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.01■□□□□ 0.31
NFX1Q12986 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
NFX1Q12986 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.01■□□□□ 0.31
NFX1Q12986 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NFX1Q12986 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NFX1Q12986 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NFX1Q12986 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NFX1Q12986 FER1L4-210ENST00000615531 5998 ntBASIC17.01■□□□□ 0.31
NFX1Q12986 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFX1Q12986 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NFX1Q12986 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.01■□□□□ 0.31
NFX1Q12986 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFX1Q12986 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFX1Q12986 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NFX1Q12986 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NFX1Q12986 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms