Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 POLD2P1-201ENST00000511220 997 ntBASIC11.97□□□□□ -0.49
HIST1H1AQ02539 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 AC061975.2-201ENST00000581722 295 ntBASIC11.97□□□□□ -0.49
HIST1H1AQ02539 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 AC092127.1-201ENST00000567093 3455 ntBASIC11.97□□□□□ -0.49
HIST1H1AQ02539 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HIST1H1AQ02539 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 ZBTB45P2-201ENST00000452245 1531 ntBASIC11.96□□□□□ -0.49
HIST1H1AQ02539 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 API5-202ENST00000420461 2009 ntTSL 2 BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 HLA-H-201ENST00000383620 1096 ntBASIC11.96□□□□□ -0.49
HIST1H1AQ02539 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 NMU-202ENST00000505262 693 ntTSL 3 BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 CITED2-204ENST00000618718 901 ntTSL 2 BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC11.96□□□□□ -0.49
HIST1H1AQ02539 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
HIST1H1AQ02539 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
HIST1H1AQ02539 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC11.96□□□□□ -0.5
HIST1H1AQ02539 AC105250.1-201ENST00000509378 2057 ntBASIC11.96□□□□□ -0.5
HIST1H1AQ02539 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
HIST1H1AQ02539 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
HIST1H1AQ02539 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
HIST1H1AQ02539 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
HIST1H1AQ02539 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
HIST1H1AQ02539 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
HIST1H1AQ02539 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
HIST1H1AQ02539 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.5
HIST1H1AQ02539 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC11.96□□□□□ -0.5
HIST1H1AQ02539 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC11.96□□□□□ -0.5
HIST1H1AQ02539 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
HIST1H1AQ02539 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
HIST1H1AQ02539 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
HIST1H1AQ02539 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
HIST1H1AQ02539 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 AL691432.1-201ENST00000596308 1422 ntBASIC11.95□□□□□ -0.5
HIST1H1AQ02539 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 LRRFIP1P1-201ENST00000498774 2246 ntBASIC11.95□□□□□ -0.5
HIST1H1AQ02539 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HIST1H1AQ02539 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms