Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
SEC61A1P61619 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.69□□□□□ -0.22
SEC61A1P61619 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.69□□□□□ -0.22
SEC61A1P61619 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SEC61A1P61619 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SEC61A1P61619 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.68□□□□□ -0.22
SEC61A1P61619 TUBB3P1-201ENST00000405796 1332 ntBASIC13.68□□□□□ -0.22
SEC61A1P61619 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC61A1P61619 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.68□□□□□ -0.22
SEC61A1P61619 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.68□□□□□ -0.22
SEC61A1P61619 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC61A1P61619 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SEC61A1P61619 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SEC61A1P61619 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SEC61A1P61619 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC61A1P61619 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.68□□□□□ -0.22
SEC61A1P61619 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC61A1P61619 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.68□□□□□ -0.22
SEC61A1P61619 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC61A1P61619 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC61A1P61619 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SEC61A1P61619 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SEC61A1P61619 MIR770-201ENST00000390219 98 ntBASIC13.68□□□□□ -0.22
SEC61A1P61619 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.68□□□□□ -0.22
SEC61A1P61619 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.68□□□□□ -0.22
SEC61A1P61619 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.68□□□□□ -0.22
SEC61A1P61619 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.68□□□□□ -0.22
SEC61A1P61619 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SEC61A1P61619 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.68□□□□□ -0.22
SEC61A1P61619 AL512356.2-201ENST00000546955 174 ntBASIC13.68□□□□□ -0.22
SEC61A1P61619 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.68□□□□□ -0.22
SEC61A1P61619 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC61A1P61619 AC005498.2-205ENST00000593218 784 ntBASIC13.68□□□□□ -0.22
SEC61A1P61619 AC073389.1-201ENST00000595595 795 ntBASIC13.68□□□□□ -0.22
SEC61A1P61619 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
SEC61A1P61619 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC61A1P61619 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SEC61A1P61619 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC61A1P61619 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC61A1P61619 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC61A1P61619 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SEC61A1P61619 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC61A1P61619 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.68□□□□□ -0.22
SEC61A1P61619 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC61A1P61619 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SEC61A1P61619 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC61A1P61619 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC61A1P61619 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC61A1P61619 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SEC61A1P61619 U82695.1-201ENST00000635752 1889 ntBASIC13.67□□□□□ -0.22
SEC61A1P61619 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.67□□□□□ -0.22
SEC61A1P61619 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SEC61A1P61619 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.67□□□□□ -0.22
SEC61A1P61619 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SEC61A1P61619 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SEC61A1P61619 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.67□□□□□ -0.22
SEC61A1P61619 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC61A1P61619 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC61A1P61619 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC61A1P61619 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.67□□□□□ -0.22
SEC61A1P61619 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.67□□□□□ -0.22
SEC61A1P61619 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.67□□□□□ -0.22
SEC61A1P61619 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC61A1P61619 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SEC61A1P61619 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SEC61A1P61619 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC61A1P61619 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.67□□□□□ -0.22
SEC61A1P61619 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SEC61A1P61619 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC61A1P61619 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SEC61A1P61619 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC61A1P61619 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.67□□□□□ -0.22
SEC61A1P61619 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.67□□□□□ -0.22
SEC61A1P61619 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC61A1P61619 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.67□□□□□ -0.22
SEC61A1P61619 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.67□□□□□ -0.22
SEC61A1P61619 AC125807.1-201ENST00000483097 614 ntBASIC13.67□□□□□ -0.22
SEC61A1P61619 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.67□□□□□ -0.22
SEC61A1P61619 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.67□□□□□ -0.22
SEC61A1P61619 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.67□□□□□ -0.22
SEC61A1P61619 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.67□□□□□ -0.22
SEC61A1P61619 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC61A1P61619 AL390955.2-201ENST00000603032 514 ntBASIC13.67□□□□□ -0.22
SEC61A1P61619 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SEC61A1P61619 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SEC61A1P61619 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SEC61A1P61619 AC005252.3-201ENST00000623855 2258 ntBASIC13.67□□□□□ -0.22
SEC61A1P61619 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC61A1P61619 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC61A1P61619 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.67□□□□□ -0.22
SEC61A1P61619 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SEC61A1P61619 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SEC61A1P61619 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC61A1P61619 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SEC61A1P61619 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SEC61A1P61619 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SEC61A1P61619 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC61A1P61619 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SEC61A1P61619 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.67□□□□□ -0.22
SEC61A1P61619 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms