Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB5CP51148 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5CP51148 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5CP51148 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5CP51148 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5CP51148 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5CP51148 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB5CP51148 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5CP51148 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
RAB5CP51148 BAALC-201ENST00000297574 801 ntTSL 3 BASIC12.53□□□□□ -0.4
RAB5CP51148 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5CP51148 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5CP51148 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5CP51148 LIN28AP1-201ENST00000429574 405 ntBASIC12.53□□□□□ -0.4
RAB5CP51148 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5CP51148 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5CP51148 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
RAB5CP51148 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC12.53□□□□□ -0.4
RAB5CP51148 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
RAB5CP51148 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
RAB5CP51148 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
RAB5CP51148 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB5CP51148 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.53□□□□□ -0.4
RAB5CP51148 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB5CP51148 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5CP51148 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5CP51148 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB5CP51148 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5CP51148 PI4KAP1-204ENST00000612579 1703 ntBASIC12.53□□□□□ -0.4
RAB5CP51148 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
RAB5CP51148 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB5CP51148 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5CP51148 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5CP51148 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5CP51148 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5CP51148 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5CP51148 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
RAB5CP51148 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB5CP51148 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5CP51148 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB5CP51148 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB5CP51148 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
RAB5CP51148 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB5CP51148 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RAB5CP51148 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB5CP51148 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC12.52□□□□□ -0.4
RAB5CP51148 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.52□□□□□ -0.4
RAB5CP51148 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB5CP51148 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.52□□□□□ -0.4
RAB5CP51148 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB5CP51148 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB5CP51148 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RAB5CP51148 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.52□□□□□ -0.4
RAB5CP51148 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RAB5CP51148 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RAB5CP51148 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RAB5CP51148 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
RAB5CP51148 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB5CP51148 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
RAB5CP51148 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5CP51148 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5CP51148 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB5CP51148 ABCD1P5-201ENST00000445663 754 ntBASIC12.52□□□□□ -0.41
RAB5CP51148 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5CP51148 MTRF1LP2-201ENST00000506027 1122 ntBASIC12.52□□□□□ -0.41
RAB5CP51148 LY6E-213ENST00000522528 606 ntTSL 3 BASIC12.52□□□□□ -0.41
RAB5CP51148 AP002469.2-201ENST00000531724 424 ntBASIC12.52□□□□□ -0.41
RAB5CP51148 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.52□□□□□ -0.41
RAB5CP51148 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB5CP51148 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB5CP51148 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC12.52□□□□□ -0.41
RAB5CP51148 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.52□□□□□ -0.41
RAB5CP51148 AL589182.2-201ENST00000619332 1049 ntBASIC12.52□□□□□ -0.41
RAB5CP51148 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.52□□□□□ -0.41
RAB5CP51148 TMEM191A-211ENST00000637163 1067 ntBASIC12.52□□□□□ -0.41
RAB5CP51148 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
RAB5CP51148 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
RAB5CP51148 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
RAB5CP51148 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
RAB5CP51148 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
RAB5CP51148 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5CP51148 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5CP51148 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5CP51148 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5CP51148 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5CP51148 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
RAB5CP51148 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.52□□□□□ -0.41
RAB5CP51148 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
RAB5CP51148 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
RAB5CP51148 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.52□□□□□ -0.41
RAB5CP51148 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB5CP51148 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
RAB5CP51148 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
RAB5CP51148 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB5CP51148 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5CP51148 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5CP51148 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5CP51148 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
RAB5CP51148 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB5CP51148 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms