Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.5□□□□□ -0.09
RNF144AP50876 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RNF144AP50876 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RNF144AP50876 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.5□□□□□ -0.09
RNF144AP50876 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RNF144AP50876 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.5□□□□□ -0.09
RNF144AP50876 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.49□□□□□ -0.09
RNF144AP50876 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.49□□□□□ -0.09
RNF144AP50876 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.49□□□□□ -0.09
RNF144AP50876 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.49□□□□□ -0.09
RNF144AP50876 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.49□□□□□ -0.09
RNF144AP50876 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RNF144AP50876 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.49□□□□□ -0.09
RNF144AP50876 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
RNF144AP50876 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RNF144AP50876 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.49□□□□□ -0.09
RNF144AP50876 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RNF144AP50876 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.49□□□□□ -0.09
RNF144AP50876 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RNF144AP50876 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.49□□□□□ -0.09
RNF144AP50876 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.49□□□□□ -0.09
RNF144AP50876 AC136604.1-201ENST00000418535 575 ntBASIC14.49□□□□□ -0.09
RNF144AP50876 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.49□□□□□ -0.09
RNF144AP50876 RN7SL618P-201ENST00000477850 296 ntBASIC14.49□□□□□ -0.09
RNF144AP50876 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.49□□□□□ -0.09
RNF144AP50876 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.49□□□□□ -0.09
RNF144AP50876 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 AC044860.1-202ENST00000559481 777 ntBASIC14.49□□□□□ -0.09
RNF144AP50876 AC140878.1-201ENST00000565277 250 ntBASIC14.49□□□□□ -0.09
RNF144AP50876 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.49□□□□□ -0.09
RNF144AP50876 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.49□□□□□ -0.09
RNF144AP50876 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 AP003400.6-201ENST00000624698 740 ntBASIC14.49□□□□□ -0.09
RNF144AP50876 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
RNF144AP50876 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
RNF144AP50876 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.49□□□□□ -0.09
RNF144AP50876 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.49□□□□□ -0.09
RNF144AP50876 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.49□□□□□ -0.09
RNF144AP50876 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 AC100757.3-201ENST00000622361 1406 ntBASIC14.49□□□□□ -0.09
RNF144AP50876 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNF144AP50876 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF144AP50876 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
RNF144AP50876 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RNF144AP50876 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.48□□□□□ -0.09
RNF144AP50876 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF144AP50876 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RNF144AP50876 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF144AP50876 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RNF144AP50876 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF144AP50876 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF144AP50876 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RNF144AP50876 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RNF144AP50876 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF144AP50876 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF144AP50876 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.48□□□□□ -0.09
RNF144AP50876 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RNF144AP50876 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNF144AP50876 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RNF144AP50876 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.48□□□□□ -0.09
RNF144AP50876 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.48□□□□□ -0.09
RNF144AP50876 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.48□□□□□ -0.09
RNF144AP50876 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.48□□□□□ -0.09
RNF144AP50876 AC010336.2-201ENST00000564226 506 ntBASIC14.48□□□□□ -0.09
RNF144AP50876 AL390955.2-201ENST00000603032 514 ntBASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms