Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDK7P50613 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CDK7P50613 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.05■□□□□ 0.32
CDK7P50613 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.05■□□□□ 0.32
CDK7P50613 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK7P50613 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDK7P50613 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.05■□□□□ 0.32
CDK7P50613 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDK7P50613 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.05■□□□□ 0.32
CDK7P50613 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK7P50613 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK7P50613 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDK7P50613 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDK7P50613 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK7P50613 AC006449.6-201ENST00000612330 2296 ntBASIC17.04■□□□□ 0.32
CDK7P50613 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.04■□□□□ 0.32
CDK7P50613 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK7P50613 CYP2T1P-202ENST00000641596 2535 ntBASIC17.04■□□□□ 0.32
CDK7P50613 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDK7P50613 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK7P50613 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.04■□□□□ 0.32
CDK7P50613 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CDK7P50613 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDK7P50613 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDK7P50613 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDK7P50613 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.04■□□□□ 0.32
CDK7P50613 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.04■□□□□ 0.32
CDK7P50613 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.04■□□□□ 0.32
CDK7P50613 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDK7P50613 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDK7P50613 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.04■□□□□ 0.32
CDK7P50613 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.04■□□□□ 0.32
CDK7P50613 SERPINA13P-202ENST00000478994 924 ntBASIC17.04■□□□□ 0.32
CDK7P50613 AC044849.1-201ENST00000519737 1188 ntBASIC17.04■□□□□ 0.32
CDK7P50613 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDK7P50613 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDK7P50613 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.04■□□□□ 0.32
CDK7P50613 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.04■□□□□ 0.32
CDK7P50613 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CDK7P50613 AC091812.3-201ENST00000621362 345 ntBASIC17.04■□□□□ 0.32
CDK7P50613 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDK7P50613 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDK7P50613 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.04■□□□□ 0.32
CDK7P50613 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDK7P50613 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK7P50613 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDK7P50613 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDK7P50613 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.04■□□□□ 0.32
CDK7P50613 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDK7P50613 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.04■□□□□ 0.32
CDK7P50613 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDK7P50613 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CDK7P50613 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK7P50613 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDK7P50613 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.03■□□□□ 0.32
CDK7P50613 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK7P50613 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
CDK7P50613 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK7P50613 TUBBP5-203ENST00000508529 1334 ntBASIC17.03■□□□□ 0.32
CDK7P50613 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK7P50613 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK7P50613 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.03■□□□□ 0.32
CDK7P50613 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
CDK7P50613 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.03■□□□□ 0.32
CDK7P50613 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.03■□□□□ 0.32
CDK7P50613 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK7P50613 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.03■□□□□ 0.32
CDK7P50613 FAM8A4P-201ENST00000435433 1213 ntBASIC17.03■□□□□ 0.32
CDK7P50613 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.03■□□□□ 0.32
CDK7P50613 COX5BP1-201ENST00000507622 393 ntBASIC17.03■□□□□ 0.32
CDK7P50613 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.03■□□□□ 0.32
CDK7P50613 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.03■□□□□ 0.32
CDK7P50613 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.03■□□□□ 0.32
CDK7P50613 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDK7P50613 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK7P50613 AC025181.2-201ENST00000606994 802 ntBASIC17.03■□□□□ 0.32
CDK7P50613 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDK7P50613 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.03■□□□□ 0.32
CDK7P50613 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK7P50613 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK7P50613 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK7P50613 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.03■□□□□ 0.32
CDK7P50613 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.03■□□□□ 0.32
CDK7P50613 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CDK7P50613 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK7P50613 AC092171.3-201ENST00000610122 2651 ntBASIC17.03■□□□□ 0.32
CDK7P50613 AC026691.1-201ENST00000602502 2017 ntBASIC17.03■□□□□ 0.32
CDK7P50613 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDK7P50613 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CDK7P50613 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CDK7P50613 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK7P50613 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDK7P50613 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK7P50613 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK7P50613 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDK7P50613 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.02■□□□□ 0.32
CDK7P50613 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK7P50613 AC091046.1-201ENST00000331871 207 ntBASIC17.02■□□□□ 0.32
CDK7P50613 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDK7P50613 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms