Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 REXO1L4P-201ENST00000605109 1937 ntBASIC16.92■□□□□ 0.3
HTTP42858 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HTTP42858 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HTTP42858 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HTTP42858 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HTTP42858 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC16.92■□□□□ 0.3
HTTP42858 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.92■□□□□ 0.3
HTTP42858 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HTTP42858 AC093909.3-201ENST00000504783 336 ntBASIC16.92■□□□□ 0.3
HTTP42858 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HTTP42858 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.92■□□□□ 0.3
HTTP42858 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
HTTP42858 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.92■□□□□ 0.3
HTTP42858 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.92■□□□□ 0.3
HTTP42858 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTTP42858 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.91■□□□□ 0.3
HTTP42858 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTTP42858 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTTP42858 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTTP42858 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HTTP42858 AL583805.1-201ENST00000391389 531 ntBASIC16.91■□□□□ 0.3
HTTP42858 AC026320.2-201ENST00000434379 478 ntBASIC16.91■□□□□ 0.3
HTTP42858 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.91■□□□□ 0.3
HTTP42858 AC026434.2-201ENST00000506094 1078 ntBASIC16.91■□□□□ 0.3
HTTP42858 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.91■□□□□ 0.3
HTTP42858 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HTTP42858 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.91■□□□□ 0.3
HTTP42858 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTTP42858 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HTTP42858 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.91■□□□□ 0.3
HTTP42858 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HTTP42858 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.91■□□□□ 0.3
HTTP42858 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.91■□□□□ 0.3
HTTP42858 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.91■□□□□ 0.3
HTTP42858 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HTTP42858 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HTTP42858 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.91■□□□□ 0.3
HTTP42858 KRT17P4-201ENST00000429445 819 ntBASIC16.91■□□□□ 0.3
HTTP42858 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC16.91■□□□□ 0.3
HTTP42858 AL135901.1-201ENST00000451812 333 ntBASIC16.91■□□□□ 0.3
HTTP42858 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.91■□□□□ 0.3
HTTP42858 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC16.91■□□□□ 0.3
HTTP42858 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HTTP42858 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HTTP42858 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
HTTP42858 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
HTTP42858 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.9■□□□□ 0.3
HTTP42858 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.9■□□□□ 0.3
HTTP42858 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC16.9■□□□□ 0.3
HTTP42858 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
HTTP42858 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
HTTP42858 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
HTTP42858 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.9■□□□□ 0.3
HTTP42858 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTTP42858 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.9■□□□□ 0.3
HTTP42858 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.9■□□□□ 0.3
HTTP42858 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.9■□□□□ 0.3
HTTP42858 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTTP42858 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTTP42858 CYP4F23P-201ENST00000593402 1579 ntBASIC16.9■□□□□ 0.3
HTTP42858 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.9■□□□□ 0.3
HTTP42858 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HTTP42858 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTTP42858 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTTP42858 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC16.9■□□□□ 0.3
HTTP42858 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HTTP42858 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.9■□□□□ 0.3
HTTP42858 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HTTP42858 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.9■□□□□ 0.3
HTTP42858 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTTP42858 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HTTP42858 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTTP42858 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HTTP42858 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HTTP42858 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HTTP42858 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.9■□□□□ 0.3
HTTP42858 BCAS2P2-201ENST00000425064 674 ntBASIC16.9■□□□□ 0.3
HTTP42858 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC16.9■□□□□ 0.3
HTTP42858 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HTTP42858 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.9■□□□□ 0.3
HTTP42858 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC16.9■□□□□ 0.3
HTTP42858 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.9■□□□□ 0.3
HTTP42858 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.9■□□□□ 0.3
HTTP42858 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC16.9■□□□□ 0.3
HTTP42858 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HTTP42858 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
HTTP42858 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HTTP42858 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTTP42858 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HTTP42858 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HTTP42858 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTTP42858 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTTP42858 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HTTP42858 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTTP42858 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTTP42858 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HTTP42858 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.89■□□□□ 0.29
HTTP42858 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTTP42858 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HTTP42858 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms