Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC10.53□□□□□ -0.72
CXCL5P42830 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC10.53□□□□□ -0.72
CXCL5P42830 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC10.53□□□□□ -0.72
CXCL5P42830 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
CXCL5P42830 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC10.53□□□□□ -0.72
CXCL5P42830 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC10.53□□□□□ -0.72
CXCL5P42830 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC10.53□□□□□ -0.72
CXCL5P42830 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC10.53□□□□□ -0.72
CXCL5P42830 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC10.53□□□□□ -0.72
CXCL5P42830 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 STRN-202ENST00000379213 2254 ntTSL 5 BASIC10.53□□□□□ -0.72
CXCL5P42830 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC10.53□□□□□ -0.72
CXCL5P42830 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
CXCL5P42830 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
CXCL5P42830 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC10.53□□□□□ -0.72
CXCL5P42830 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 CBR1-202ENST00000399191 838 ntTSL 3 BASIC10.53□□□□□ -0.72
CXCL5P42830 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
CXCL5P42830 IGLL3P-201ENST00000412472 434 ntBASIC10.53□□□□□ -0.72
CXCL5P42830 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC10.53□□□□□ -0.72
CXCL5P42830 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC10.53□□□□□ -0.72
CXCL5P42830 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC10.53□□□□□ -0.72
CXCL5P42830 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC10.53□□□□□ -0.72
CXCL5P42830 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC10.53□□□□□ -0.72
CXCL5P42830 AC012640.2-201ENST00000561606 901 ntBASIC10.53□□□□□ -0.72
CXCL5P42830 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC10.53□□□□□ -0.72
CXCL5P42830 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC10.53□□□□□ -0.72
CXCL5P42830 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC10.53□□□□□ -0.72
CXCL5P42830 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
CXCL5P42830 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC10.53□□□□□ -0.72
CXCL5P42830 SPTSSB-204ENST00000617024 1292 ntBASIC10.53□□□□□ -0.72
CXCL5P42830 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC10.53□□□□□ -0.72
CXCL5P42830 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
CXCL5P42830 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC10.53□□□□□ -0.72
CXCL5P42830 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
CXCL5P42830 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
CXCL5P42830 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
CXCL5P42830 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC10.53□□□□□ -0.72
CXCL5P42830 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC10.52□□□□□ -0.72
CXCL5P42830 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CXCL5P42830 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC10.52□□□□□ -0.72
CXCL5P42830 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
CXCL5P42830 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC10.52□□□□□ -0.72
CXCL5P42830 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CXCL5P42830 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
CXCL5P42830 BNIP3P1-202ENST00000550043 1585 ntBASIC10.52□□□□□ -0.72
CXCL5P42830 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CXCL5P42830 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
CXCL5P42830 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
CXCL5P42830 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
CXCL5P42830 CICP23-201ENST00000605013 2741 ntBASIC10.52□□□□□ -0.72
CXCL5P42830 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC10.52□□□□□ -0.72
CXCL5P42830 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
CXCL5P42830 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC10.52□□□□□ -0.72
CXCL5P42830 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
CXCL5P42830 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CXCL5P42830 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CXCL5P42830 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.73
CXCL5P42830 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
CXCL5P42830 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
CXCL5P42830 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CXCL5P42830 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CXCL5P42830 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
CXCL5P42830 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CXCL5P42830 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
CXCL5P42830 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CXCL5P42830 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC10.52□□□□□ -0.73
CXCL5P42830 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
CXCL5P42830 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
CXCL5P42830 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC10.52□□□□□ -0.73
CXCL5P42830 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC10.52□□□□□ -0.73
CXCL5P42830 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CXCL5P42830 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CXCL5P42830 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC10.52□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms