Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.74■□□□□ 0.11
HADHAP40939 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HADHAP40939 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.74■□□□□ 0.11
HADHAP40939 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
HADHAP40939 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
HADHAP40939 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
HADHAP40939 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HADHAP40939 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.74■□□□□ 0.11
HADHAP40939 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HADHAP40939 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.74■□□□□ 0.11
HADHAP40939 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.74■□□□□ 0.11
HADHAP40939 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HADHAP40939 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.74■□□□□ 0.11
HADHAP40939 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HADHAP40939 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.74■□□□□ 0.11
HADHAP40939 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.74■□□□□ 0.11
HADHAP40939 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.74■□□□□ 0.11
HADHAP40939 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.74■□□□□ 0.11
HADHAP40939 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
HADHAP40939 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.74■□□□□ 0.11
HADHAP40939 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HADHAP40939 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HADHAP40939 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HADHAP40939 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HADHAP40939 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HADHAP40939 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HADHAP40939 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
HADHAP40939 AC148477.4-201ENST00000613430 1793 ntBASIC15.74■□□□□ 0.11
HADHAP40939 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HADHAP40939 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
HADHAP40939 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HADHAP40939 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HADHAP40939 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HADHAP40939 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
HADHAP40939 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HADHAP40939 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HADHAP40939 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HADHAP40939 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.73■□□□□ 0.11
HADHAP40939 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.73■□□□□ 0.11
HADHAP40939 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HADHAP40939 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HADHAP40939 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HADHAP40939 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HADHAP40939 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HADHAP40939 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HADHAP40939 BTBD7P1-201ENST00000447253 1453 ntBASIC15.73■□□□□ 0.11
HADHAP40939 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.73■□□□□ 0.11
HADHAP40939 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HADHAP40939 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HADHAP40939 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HADHAP40939 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HADHAP40939 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.73■□□□□ 0.11
HADHAP40939 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.73■□□□□ 0.11
HADHAP40939 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HADHAP40939 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.73■□□□□ 0.11
HADHAP40939 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.73■□□□□ 0.11
HADHAP40939 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.73■□□□□ 0.11
HADHAP40939 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.73■□□□□ 0.11
HADHAP40939 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HADHAP40939 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.73■□□□□ 0.11
HADHAP40939 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HADHAP40939 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.73■□□□□ 0.11
HADHAP40939 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.73■□□□□ 0.11
HADHAP40939 MIR3197-201ENST00000582241 73 ntBASIC15.73■□□□□ 0.11
HADHAP40939 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HADHAP40939 AL844908.2-201ENST00000609461 460 ntBASIC15.73■□□□□ 0.11
HADHAP40939 AL390754.1-201ENST00000619088 582 ntBASIC15.73■□□□□ 0.11
HADHAP40939 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.73■□□□□ 0.11
HADHAP40939 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HADHAP40939 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HADHAP40939 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HADHAP40939 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HADHAP40939 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HADHAP40939 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HADHAP40939 MYO15B-237ENST00000642007 4893 ntBASIC15.73■□□□□ 0.11
HADHAP40939 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.73■□□□□ 0.11
HADHAP40939 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HADHAP40939 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HADHAP40939 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HADHAP40939 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HADHAP40939 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.73■□□□□ 0.11
HADHAP40939 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HADHAP40939 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HADHAP40939 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.72■□□□□ 0.11
HADHAP40939 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.72■□□□□ 0.11
HADHAP40939 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
HADHAP40939 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.72■□□□□ 0.11
HADHAP40939 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.72■□□□□ 0.11
HADHAP40939 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.72■□□□□ 0.11
HADHAP40939 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HADHAP40939 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.72■□□□□ 0.11
HADHAP40939 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HADHAP40939 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HADHAP40939 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.72■□□□□ 0.11
HADHAP40939 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HADHAP40939 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.72■□□□□ 0.11
HADHAP40939 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HADHAP40939 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
HADHAP40939 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HADHAP40939 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms