Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.4■□□□□ 0.22
CHKAP35790 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.4■□□□□ 0.22
CHKAP35790 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CHKAP35790 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.4■□□□□ 0.22
CHKAP35790 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.4■□□□□ 0.22
CHKAP35790 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.4■□□□□ 0.22
CHKAP35790 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHKAP35790 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHKAP35790 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHKAP35790 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHKAP35790 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHKAP35790 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHKAP35790 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHKAP35790 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.4■□□□□ 0.22
CHKAP35790 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.4■□□□□ 0.22
CHKAP35790 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHKAP35790 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CHKAP35790 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.4■□□□□ 0.22
CHKAP35790 AC023908.3-201ENST00000564211 3047 ntBASIC16.4■□□□□ 0.22
CHKAP35790 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHKAP35790 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHKAP35790 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CHKAP35790 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CHKAP35790 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHKAP35790 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHKAP35790 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHKAP35790 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHKAP35790 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHKAP35790 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CHKAP35790 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHKAP35790 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHKAP35790 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHKAP35790 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.39■□□□□ 0.21
CHKAP35790 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CHKAP35790 AL589987.1-201ENST00000453380 819 ntBASIC16.39■□□□□ 0.21
CHKAP35790 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.39■□□□□ 0.21
CHKAP35790 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.39■□□□□ 0.21
CHKAP35790 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.39■□□□□ 0.21
CHKAP35790 RARRES2P5-201ENST00000564013 466 ntBASIC16.39■□□□□ 0.21
CHKAP35790 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.39■□□□□ 0.21
CHKAP35790 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.39■□□□□ 0.21
CHKAP35790 CHCHD2P3-201ENST00000603038 451 ntBASIC16.39■□□□□ 0.21
CHKAP35790 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CHKAP35790 SNX18-202ENST00000343017 3140 ntBASIC16.39■□□□□ 0.21
CHKAP35790 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CHKAP35790 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHKAP35790 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHKAP35790 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHKAP35790 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHKAP35790 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHKAP35790 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHKAP35790 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.39■□□□□ 0.21
CHKAP35790 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.38■□□□□ 0.21
CHKAP35790 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHKAP35790 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHKAP35790 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHKAP35790 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHKAP35790 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.38■□□□□ 0.21
CHKAP35790 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHKAP35790 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHKAP35790 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
CHKAP35790 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHKAP35790 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CHKAP35790 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.38■□□□□ 0.21
CHKAP35790 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHKAP35790 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHKAP35790 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHKAP35790 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.38■□□□□ 0.21
CHKAP35790 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHKAP35790 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.38■□□□□ 0.21
CHKAP35790 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.38■□□□□ 0.21
CHKAP35790 TARDBPP1-201ENST00000442013 1203 ntBASIC16.38■□□□□ 0.21
CHKAP35790 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CHKAP35790 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CHKAP35790 AC093726.1-201ENST00000608064 963 ntBASIC16.38■□□□□ 0.21
CHKAP35790 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHKAP35790 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHKAP35790 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHKAP35790 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHKAP35790 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.38■□□□□ 0.21
CHKAP35790 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHKAP35790 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHKAP35790 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CHKAP35790 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHKAP35790 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.38■□□□□ 0.21
CHKAP35790 CICP23-201ENST00000605013 2741 ntBASIC16.38■□□□□ 0.21
CHKAP35790 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.38■□□□□ 0.21
CHKAP35790 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHKAP35790 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.38■□□□□ 0.21
CHKAP35790 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.37■□□□□ 0.21
CHKAP35790 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CHKAP35790 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHKAP35790 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CHKAP35790 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHKAP35790 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.37■□□□□ 0.21
CHKAP35790 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CHKAP35790 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.37■□□□□ 0.21
CHKAP35790 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
CHKAP35790 AC138969.3-201ENST00000546612 1459 ntBASIC16.37■□□□□ 0.21
CHKAP35790 AC138932.2-201ENST00000548268 1459 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms