Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SHC1P29353 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SHC1P29353 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.27□□□□□ -0.12
SHC1P29353 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SHC1P29353 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SHC1P29353 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SHC1P29353 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SHC1P29353 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SHC1P29353 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.27□□□□□ -0.12
SHC1P29353 AC026748.1-201ENST00000624349 3251 ntBASIC14.27□□□□□ -0.12
SHC1P29353 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.27□□□□□ -0.12
SHC1P29353 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SHC1P29353 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SHC1P29353 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SHC1P29353 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SHC1P29353 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SHC1P29353 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.27□□□□□ -0.12
SHC1P29353 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SHC1P29353 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SHC1P29353 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SHC1P29353 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SHC1P29353 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.27□□□□□ -0.13
SHC1P29353 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.27□□□□□ -0.13
SHC1P29353 FAM8A3P-201ENST00000427218 844 ntBASIC14.27□□□□□ -0.13
SHC1P29353 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.27□□□□□ -0.13
SHC1P29353 KRT18P64-201ENST00000434946 1219 ntBASIC14.27□□□□□ -0.13
SHC1P29353 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.27□□□□□ -0.13
SHC1P29353 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SHC1P29353 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.27□□□□□ -0.13
SHC1P29353 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.27□□□□□ -0.13
SHC1P29353 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHC1P29353 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.27□□□□□ -0.13
SHC1P29353 ZNF890P-202ENST00000530367 1156 ntBASIC14.27□□□□□ -0.13
SHC1P29353 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.27□□□□□ -0.13
SHC1P29353 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.27□□□□□ -0.13
SHC1P29353 AC004461.2-201ENST00000629517 803 ntBASIC14.27□□□□□ -0.13
SHC1P29353 AF228730.6-201ENST00000641497 218 ntBASIC14.27□□□□□ -0.13
SHC1P29353 AC084121.3-201ENST00000641716 218 ntBASIC14.27□□□□□ -0.13
SHC1P29353 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.27□□□□□ -0.13
SHC1P29353 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.27□□□□□ -0.13
SHC1P29353 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SHC1P29353 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHC1P29353 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
SHC1P29353 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHC1P29353 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SHC1P29353 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.27□□□□□ -0.13
SHC1P29353 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHC1P29353 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SHC1P29353 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.27□□□□□ -0.13
SHC1P29353 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.27□□□□□ -0.13
SHC1P29353 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
SHC1P29353 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.27□□□□□ -0.13
SHC1P29353 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
SHC1P29353 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.27□□□□□ -0.13
SHC1P29353 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SHC1P29353 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.26□□□□□ -0.13
SHC1P29353 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHC1P29353 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHC1P29353 AC091951.1-201ENST00000512854 2465 ntBASIC14.26□□□□□ -0.13
SHC1P29353 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHC1P29353 Z97205.2-201ENST00000564697 1639 ntBASIC14.26□□□□□ -0.13
SHC1P29353 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.26□□□□□ -0.13
SHC1P29353 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHC1P29353 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.26□□□□□ -0.13
SHC1P29353 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHC1P29353 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.26□□□□□ -0.13
SHC1P29353 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.26□□□□□ -0.13
SHC1P29353 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.26□□□□□ -0.13
SHC1P29353 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.26□□□□□ -0.13
SHC1P29353 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SHC1P29353 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHC1P29353 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHC1P29353 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SHC1P29353 AC092127.1-201ENST00000567093 3455 ntBASIC14.26□□□□□ -0.13
SHC1P29353 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHC1P29353 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHC1P29353 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHC1P29353 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.26□□□□□ -0.13
SHC1P29353 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.26□□□□□ -0.13
SHC1P29353 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHC1P29353 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHC1P29353 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHC1P29353 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHC1P29353 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHC1P29353 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.26□□□□□ -0.13
SHC1P29353 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHC1P29353 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHC1P29353 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.26□□□□□ -0.13
SHC1P29353 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.26□□□□□ -0.13
SHC1P29353 AL589987.1-201ENST00000453380 819 ntBASIC14.26□□□□□ -0.13
SHC1P29353 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.26□□□□□ -0.13
SHC1P29353 SDHAP3-202ENST00000515467 728 ntBASIC14.26□□□□□ -0.13
SHC1P29353 AC135586.1-201ENST00000539323 574 ntBASIC14.26□□□□□ -0.13
SHC1P29353 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.26□□□□□ -0.13
SHC1P29353 AJ011932.1-201ENST00000621707 465 ntBASIC14.26□□□□□ -0.13
SHC1P29353 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.26□□□□□ -0.13
SHC1P29353 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHC1P29353 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
SHC1P29353 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.26□□□□□ -0.13
SHC1P29353 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms