Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD40P25942 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CD40P25942 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CD40P25942 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.35□□□□□ -0.27
CD40P25942 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD40P25942 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40P25942 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40P25942 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40P25942 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40P25942 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.34□□□□□ -0.27
CD40P25942 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40P25942 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.34□□□□□ -0.27
CD40P25942 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40P25942 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CD40P25942 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CD40P25942 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40P25942 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40P25942 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40P25942 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40P25942 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CD40P25942 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CD40P25942 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.34□□□□□ -0.27
CD40P25942 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.34□□□□□ -0.27
CD40P25942 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
CD40P25942 AC007274.1-201ENST00000439805 662 ntBASIC13.34□□□□□ -0.27
CD40P25942 CTBP2P5-201ENST00000454986 1264 ntBASIC13.34□□□□□ -0.27
CD40P25942 AC007551.1-201ENST00000457394 519 ntBASIC13.34□□□□□ -0.27
CD40P25942 AC106760.1-201ENST00000508690 800 ntBASIC13.34□□□□□ -0.27
CD40P25942 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.34□□□□□ -0.27
CD40P25942 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.34□□□□□ -0.27
CD40P25942 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.34□□□□□ -0.27
CD40P25942 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.34□□□□□ -0.27
CD40P25942 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.34□□□□□ -0.27
CD40P25942 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.34□□□□□ -0.27
CD40P25942 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.34□□□□□ -0.27
CD40P25942 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.34□□□□□ -0.27
CD40P25942 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.34□□□□□ -0.27
CD40P25942 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.34□□□□□ -0.27
CD40P25942 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.34□□□□□ -0.27
CD40P25942 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.34□□□□□ -0.27
CD40P25942 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CD40P25942 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
CD40P25942 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40P25942 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CD40P25942 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CD40P25942 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CD40P25942 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40P25942 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.34□□□□□ -0.27
CD40P25942 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.34□□□□□ -0.27
CD40P25942 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40P25942 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
CD40P25942 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40P25942 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40P25942 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40P25942 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40P25942 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD40P25942 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CD40P25942 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CD40P25942 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.33□□□□□ -0.27
CD40P25942 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.33□□□□□ -0.27
CD40P25942 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CD40P25942 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.33□□□□□ -0.27
CD40P25942 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
CD40P25942 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CD40P25942 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
CD40P25942 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.33□□□□□ -0.28
CD40P25942 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.33□□□□□ -0.28
CD40P25942 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 ANKRD19P-201ENST00000338192 862 ntBASIC13.33□□□□□ -0.28
CD40P25942 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.33□□□□□ -0.28
CD40P25942 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 RPL5P21-201ENST00000404620 815 ntBASIC13.33□□□□□ -0.28
CD40P25942 NUS1P3-201ENST00000423502 862 ntBASIC13.33□□□□□ -0.28
CD40P25942 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 AC016694.1-201ENST00000434179 700 ntBASIC13.33□□□□□ -0.28
CD40P25942 RPS2P32-201ENST00000439199 892 ntBASIC13.33□□□□□ -0.28
CD40P25942 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
CD40P25942 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
CD40P25942 FTH1P14-201ENST00000482930 551 ntBASIC13.33□□□□□ -0.28
CD40P25942 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.33□□□□□ -0.28
CD40P25942 AC004066.1-201ENST00000502488 802 ntBASIC13.33□□□□□ -0.28
CD40P25942 AC119751.2-201ENST00000504529 210 ntBASIC13.33□□□□□ -0.28
CD40P25942 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CD40P25942 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.33□□□□□ -0.28
CD40P25942 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.33□□□□□ -0.28
CD40P25942 MIR4259-201ENST00000584466 101 ntBASIC13.33□□□□□ -0.28
CD40P25942 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.33□□□□□ -0.28
CD40P25942 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.33□□□□□ -0.28
CD40P25942 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.33□□□□□ -0.28
CD40P25942 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CD40P25942 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms