Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.54□□□□□ -0.24
ACKR3P25106 AC126365.1-201ENST00000578585 1514 ntBASIC13.54□□□□□ -0.24
ACKR3P25106 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ACKR3P25106 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.54□□□□□ -0.24
ACKR3P25106 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ACKR3P25106 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ACKR3P25106 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.53□□□□□ -0.24
ACKR3P25106 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.53□□□□□ -0.24
ACKR3P25106 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.53□□□□□ -0.24
ACKR3P25106 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.53□□□□□ -0.24
ACKR3P25106 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ACKR3P25106 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
ACKR3P25106 OR2I1P-209ENST00000641730 5365 ntBASIC13.53□□□□□ -0.24
ACKR3P25106 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ACKR3P25106 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.53□□□□□ -0.24
ACKR3P25106 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.53□□□□□ -0.24
ACKR3P25106 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
ACKR3P25106 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ACKR3P25106 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.53□□□□□ -0.24
ACKR3P25106 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 MIR1233-2-201ENST00000408138 82 ntBASIC13.53□□□□□ -0.24
ACKR3P25106 MIR1233-1-201ENST00000408722 82 ntBASIC13.53□□□□□ -0.24
ACKR3P25106 TSEN15P1-201ENST00000423257 515 ntBASIC13.53□□□□□ -0.24
ACKR3P25106 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.53□□□□□ -0.24
ACKR3P25106 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.53□□□□□ -0.24
ACKR3P25106 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.53□□□□□ -0.24
ACKR3P25106 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.53□□□□□ -0.24
ACKR3P25106 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.53□□□□□ -0.24
ACKR3P25106 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.53□□□□□ -0.24
ACKR3P25106 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.53□□□□□ -0.24
ACKR3P25106 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ACKR3P25106 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.53□□□□□ -0.24
ACKR3P25106 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.53□□□□□ -0.24
ACKR3P25106 Z92544.3-201ENST00000624747 417 ntBASIC13.53□□□□□ -0.24
ACKR3P25106 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.53□□□□□ -0.24
ACKR3P25106 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.53□□□□□ -0.24
ACKR3P25106 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.53□□□□□ -0.24
ACKR3P25106 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.53□□□□□ -0.24
ACKR3P25106 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.53□□□□□ -0.24
ACKR3P25106 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.53□□□□□ -0.24
ACKR3P25106 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.53□□□□□ -0.24
ACKR3P25106 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
ACKR3P25106 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ACKR3P25106 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
ACKR3P25106 AC023024.2-201ENST00000623561 1993 ntBASIC13.52□□□□□ -0.24
ACKR3P25106 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ACKR3P25106 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ACKR3P25106 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ACKR3P25106 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
ACKR3P25106 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ACKR3P25106 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ACKR3P25106 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ACKR3P25106 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ACKR3P25106 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ACKR3P25106 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.52□□□□□ -0.25
ACKR3P25106 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.52□□□□□ -0.25
ACKR3P25106 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.52□□□□□ -0.25
ACKR3P25106 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ACKR3P25106 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.52□□□□□ -0.25
ACKR3P25106 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.52□□□□□ -0.25
ACKR3P25106 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.52□□□□□ -0.25
ACKR3P25106 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.52□□□□□ -0.25
ACKR3P25106 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.52□□□□□ -0.25
ACKR3P25106 SPDYE12P-201ENST00000618416 771 ntBASIC13.52□□□□□ -0.25
ACKR3P25106 AL033527.5-202ENST00000641632 1098 ntBASIC13.52□□□□□ -0.25
ACKR3P25106 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ACKR3P25106 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ACKR3P25106 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ACKR3P25106 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ACKR3P25106 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ACKR3P25106 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ACKR3P25106 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.52□□□□□ -0.25
ACKR3P25106 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ACKR3P25106 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.52□□□□□ -0.25
ACKR3P25106 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.52□□□□□ -0.25
ACKR3P25106 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms