Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATF3P18847 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATF3P18847 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC20.91■□□□□ 0.94
ATF3P18847 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ATF3P18847 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATF3P18847 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATF3P18847 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
ATF3P18847 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATF3P18847 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATF3P18847 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.91■□□□□ 0.94
ATF3P18847 KLF2P1-201ENST00000447438 1042 ntBASIC20.91■□□□□ 0.94
ATF3P18847 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC20.91■□□□□ 0.94
ATF3P18847 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC20.91■□□□□ 0.94
ATF3P18847 SCARNA21-201ENST00000517026 139 ntBASIC20.91■□□□□ 0.94
ATF3P18847 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC20.91■□□□□ 0.94
ATF3P18847 MIR3677-201ENST00000578964 60 ntBASIC20.91■□□□□ 0.94
ATF3P18847 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATF3P18847 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC20.91■□□□□ 0.94
ATF3P18847 AC005632.3-201ENST00000605544 308 ntBASIC20.91■□□□□ 0.94
ATF3P18847 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC20.91■□□□□ 0.94
ATF3P18847 AL132780.4-201ENST00000624870 1135 ntBASIC20.91■□□□□ 0.94
ATF3P18847 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.91■□□□□ 0.94
ATF3P18847 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.91■□□□□ 0.94
ATF3P18847 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATF3P18847 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
ATF3P18847 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATF3P18847 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATF3P18847 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATF3P18847 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ATF3P18847 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATF3P18847 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATF3P18847 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATF3P18847 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATF3P18847 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ATF3P18847 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATF3P18847 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATF3P18847 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATF3P18847 AC018463.1-201ENST00000456674 917 ntBASIC20.9■□□□□ 0.94
ATF3P18847 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ATF3P18847 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC20.9■□□□□ 0.94
ATF3P18847 RPL17P45-201ENST00000586289 509 ntBASIC20.9■□□□□ 0.94
ATF3P18847 MIR6858-201ENST00000620733 67 ntBASIC20.9■□□□□ 0.94
ATF3P18847 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.9■□□□□ 0.94
ATF3P18847 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ATF3P18847 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATF3P18847 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATF3P18847 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATF3P18847 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
ATF3P18847 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATF3P18847 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ATF3P18847 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATF3P18847 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.89■□□□□ 0.94
ATF3P18847 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.89■□□□□ 0.94
ATF3P18847 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATF3P18847 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATF3P18847 AC009093.2-202ENST00000620513 2079 ntBASIC20.89■□□□□ 0.93
ATF3P18847 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATF3P18847 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
ATF3P18847 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ATF3P18847 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATF3P18847 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATF3P18847 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC20.89■□□□□ 0.93
ATF3P18847 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC20.89■□□□□ 0.93
ATF3P18847 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC20.89■□□□□ 0.93
ATF3P18847 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
ATF3P18847 NAT9-220ENST00000582870 896 ntTSL 5 BASIC20.89■□□□□ 0.93
ATF3P18847 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATF3P18847 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ATF3P18847 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATF3P18847 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC20.89■□□□□ 0.93
ATF3P18847 AL161773.1-201ENST00000624845 863 ntBASIC20.89■□□□□ 0.93
ATF3P18847 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATF3P18847 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.93
ATF3P18847 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATF3P18847 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATF3P18847 AC244394.1-201ENST00000435000 1665 ntBASIC20.89■□□□□ 0.93
ATF3P18847 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
ATF3P18847 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATF3P18847 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATF3P18847 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATF3P18847 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATF3P18847 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
ATF3P18847 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATF3P18847 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATF3P18847 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ATF3P18847 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC20.88■□□□□ 0.93
ATF3P18847 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
ATF3P18847 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATF3P18847 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATF3P18847 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC20.88■□□□□ 0.93
ATF3P18847 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATF3P18847 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATF3P18847 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATF3P18847 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC20.88■□□□□ 0.93
ATF3P18847 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATF3P18847 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATF3P18847 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC20.88■□□□□ 0.93
ATF3P18847 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
ATF3P18847 AC078875.1-201ENST00000431907 724 ntBASIC20.88■□□□□ 0.93
ATF3P18847 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms