Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PSMC3P17980 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.22■□□□□ 0.19
PSMC3P17980 AC245100.3-201ENST00000441281 285 ntBASIC16.22■□□□□ 0.19
PSMC3P17980 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.22■□□□□ 0.19
PSMC3P17980 PFN1P12-201ENST00000455938 534 ntBASIC16.22■□□□□ 0.19
PSMC3P17980 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.22■□□□□ 0.19
PSMC3P17980 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PSMC3P17980 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.22■□□□□ 0.19
PSMC3P17980 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PSMC3P17980 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PSMC3P17980 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PSMC3P17980 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.22■□□□□ 0.19
PSMC3P17980 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PSMC3P17980 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
PSMC3P17980 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PSMC3P17980 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PSMC3P17980 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
PSMC3P17980 ME2P1-201ENST00000426028 1970 ntBASIC16.22■□□□□ 0.19
PSMC3P17980 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PSMC3P17980 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PSMC3P17980 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSMC3P17980 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.21■□□□□ 0.19
PSMC3P17980 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSMC3P17980 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSMC3P17980 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PSMC3P17980 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSMC3P17980 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PSMC3P17980 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PSMC3P17980 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.21■□□□□ 0.19
PSMC3P17980 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSMC3P17980 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.21■□□□□ 0.19
PSMC3P17980 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSMC3P17980 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSMC3P17980 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.21■□□□□ 0.19
PSMC3P17980 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PSMC3P17980 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSMC3P17980 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.21■□□□□ 0.19
PSMC3P17980 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSMC3P17980 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PSMC3P17980 AL121723.1-201ENST00000445194 1519 ntBASIC16.21■□□□□ 0.19
PSMC3P17980 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PSMC3P17980 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSMC3P17980 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSMC3P17980 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.21■□□□□ 0.19
PSMC3P17980 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSMC3P17980 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.21■□□□□ 0.19
PSMC3P17980 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.21■□□□□ 0.19
PSMC3P17980 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.21■□□□□ 0.19
PSMC3P17980 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.21■□□□□ 0.19
PSMC3P17980 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.21■□□□□ 0.19
PSMC3P17980 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PSMC3P17980 AC106760.1-201ENST00000508690 800 ntBASIC16.21■□□□□ 0.19
PSMC3P17980 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.21■□□□□ 0.19
PSMC3P17980 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
PSMC3P17980 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.21■□□□□ 0.19
PSMC3P17980 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.21■□□□□ 0.19
PSMC3P17980 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.21■□□□□ 0.19
PSMC3P17980 AC010328.2-201ENST00000597698 1111 ntBASIC16.21■□□□□ 0.19
PSMC3P17980 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.21■□□□□ 0.19
PSMC3P17980 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.21■□□□□ 0.19
PSMC3P17980 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.21■□□□□ 0.19
PSMC3P17980 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.21■□□□□ 0.19
PSMC3P17980 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSMC3P17980 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSMC3P17980 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.21■□□□□ 0.19
PSMC3P17980 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PSMC3P17980 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.21■□□□□ 0.19
PSMC3P17980 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSMC3P17980 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PSMC3P17980 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PSMC3P17980 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PSMC3P17980 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.21■□□□□ 0.18
PSMC3P17980 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PSMC3P17980 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
PSMC3P17980 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSMC3P17980 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSMC3P17980 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSMC3P17980 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSMC3P17980 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PSMC3P17980 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSMC3P17980 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PSMC3P17980 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSMC3P17980 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSMC3P17980 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSMC3P17980 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PSMC3P17980 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.2■□□□□ 0.18
PSMC3P17980 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSMC3P17980 ACKR1-201ENST00000368121 1240 ntBASIC16.2■□□□□ 0.18
PSMC3P17980 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.2■□□□□ 0.18
PSMC3P17980 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSMC3P17980 AC108725.1-201ENST00000495472 409 ntBASIC16.2■□□□□ 0.18
PSMC3P17980 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSMC3P17980 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.2■□□□□ 0.18
PSMC3P17980 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.2■□□□□ 0.18
PSMC3P17980 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.2■□□□□ 0.18
PSMC3P17980 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PSMC3P17980 AC097359.3-201ENST00000603982 1210 ntBASIC16.2■□□□□ 0.18
PSMC3P17980 RHOXF1P1-202ENST00000635473 501 ntBASIC16.2■□□□□ 0.18
PSMC3P17980 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PSMC3P17980 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms