Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H1DP16402 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H1DP16402 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
HIST1H1DP16402 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H1DP16402 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
HIST1H1DP16402 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H1DP16402 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.2□□□□□ -0.3
HIST1H1DP16402 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H1DP16402 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H1DP16402 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H1DP16402 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
HIST1H1DP16402 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HIST1H1DP16402 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1DP16402 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
HIST1H1DP16402 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.19□□□□□ -0.3
HIST1H1DP16402 BX640514.1-201ENST00000583223 1918 ntBASIC13.19□□□□□ -0.3
HIST1H1DP16402 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1DP16402 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.19□□□□□ -0.3
HIST1H1DP16402 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.19□□□□□ -0.3
HIST1H1DP16402 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1DP16402 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.19□□□□□ -0.3
HIST1H1DP16402 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1DP16402 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1DP16402 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1DP16402 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1DP16402 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
HIST1H1DP16402 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.19□□□□□ -0.3
HIST1H1DP16402 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1DP16402 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
HIST1H1DP16402 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.19□□□□□ -0.3
HIST1H1DP16402 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1DP16402 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
HIST1H1DP16402 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1DP16402 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1DP16402 ADH5P3-201ENST00000433842 1137 ntBASIC13.19□□□□□ -0.3
HIST1H1DP16402 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.19□□□□□ -0.3
HIST1H1DP16402 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.19□□□□□ -0.3
HIST1H1DP16402 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.19□□□□□ -0.3
HIST1H1DP16402 IGHV3-62-201ENST00000520057 340 ntBASIC13.19□□□□□ -0.3
HIST1H1DP16402 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.19□□□□□ -0.3
HIST1H1DP16402 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.19□□□□□ -0.3
HIST1H1DP16402 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.19□□□□□ -0.3
HIST1H1DP16402 KRT8P23-201ENST00000560090 1207 ntBASIC13.19□□□□□ -0.3
HIST1H1DP16402 AC243562.1-201ENST00000560672 389 ntBASIC13.19□□□□□ -0.3
HIST1H1DP16402 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.19□□□□□ -0.3
HIST1H1DP16402 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.19□□□□□ -0.3
HIST1H1DP16402 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.19□□□□□ -0.3
HIST1H1DP16402 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.19□□□□□ -0.3
HIST1H1DP16402 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.19□□□□□ -0.3
HIST1H1DP16402 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.19□□□□□ -0.3
HIST1H1DP16402 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HIST1H1DP16402 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1DP16402 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1DP16402 AC007326.2-201ENST00000624224 7579 ntBASIC13.19□□□□□ -0.3
HIST1H1DP16402 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1DP16402 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1DP16402 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1DP16402 AP000845.1-201ENST00000581677 2131 ntBASIC13.19□□□□□ -0.3
HIST1H1DP16402 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1DP16402 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1DP16402 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HIST1H1DP16402 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1DP16402 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1DP16402 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1DP16402 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1DP16402 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1DP16402 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1DP16402 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1DP16402 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1DP16402 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1DP16402 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1DP16402 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1DP16402 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1DP16402 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1DP16402 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 AL450487.1-201ENST00000426799 995 ntBASIC13.18□□□□□ -0.3
HIST1H1DP16402 SPDYE11-202ENST00000450699 704 ntBASIC13.18□□□□□ -0.3
HIST1H1DP16402 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1DP16402 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 RNA5SP416-201ENST00000516838 111 ntBASIC13.18□□□□□ -0.3
HIST1H1DP16402 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1DP16402 LINC01225-203ENST00000563550 1244 ntBASIC13.18□□□□□ -0.3
HIST1H1DP16402 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 SPDYE9P-201ENST00000570642 692 ntBASIC13.18□□□□□ -0.3
HIST1H1DP16402 SPDYE10P-202ENST00000612005 668 ntBASIC13.18□□□□□ -0.3
HIST1H1DP16402 SPDYE8P-202ENST00000612377 668 ntBASIC13.18□□□□□ -0.3
HIST1H1DP16402 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
HIST1H1DP16402 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1DP16402 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HIST1H1DP16402 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms