Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MS4A1P11836 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MS4A1P11836 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC19.95■□□□□ 0.78
MS4A1P11836 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.95■□□□□ 0.78
MS4A1P11836 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.95■□□□□ 0.78
MS4A1P11836 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.95■□□□□ 0.78
MS4A1P11836 AC015922.1-201ENST00000421102 1152 ntBASIC19.95■□□□□ 0.78
MS4A1P11836 AC107890.1-201ENST00000422478 521 ntBASIC19.95■□□□□ 0.78
MS4A1P11836 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.95■□□□□ 0.78
MS4A1P11836 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.95■□□□□ 0.78
MS4A1P11836 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MS4A1P11836 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.95■□□□□ 0.78
MS4A1P11836 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.95■□□□□ 0.78
MS4A1P11836 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MS4A1P11836 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC19.95■□□□□ 0.78
MS4A1P11836 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC19.95■□□□□ 0.78
MS4A1P11836 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MS4A1P11836 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC19.95■□□□□ 0.78
MS4A1P11836 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MS4A1P11836 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MS4A1P11836 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
MS4A1P11836 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MS4A1P11836 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MS4A1P11836 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
MS4A1P11836 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
MS4A1P11836 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC19.95■□□□□ 0.78
MS4A1P11836 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MS4A1P11836 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
MS4A1P11836 ZEB1-AS1-208ENST00000607166 2503 ntBASIC19.95■□□□□ 0.78
MS4A1P11836 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MS4A1P11836 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC19.95■□□□□ 0.78
MS4A1P11836 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC19.94■□□□□ 0.78
MS4A1P11836 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.94■□□□□ 0.78
MS4A1P11836 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A1P11836 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.94■□□□□ 0.78
MS4A1P11836 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A1P11836 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A1P11836 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A1P11836 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A1P11836 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A1P11836 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A1P11836 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A1P11836 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A1P11836 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A1P11836 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A1P11836 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A1P11836 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A1P11836 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A1P11836 TOMM22P5-201ENST00000416399 439 ntBASIC19.94■□□□□ 0.78
MS4A1P11836 RPL13P2-201ENST00000440687 659 ntBASIC19.94■□□□□ 0.78
MS4A1P11836 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.94■□□□□ 0.78
MS4A1P11836 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A1P11836 ZNF890P-202ENST00000530367 1156 ntBASIC19.94■□□□□ 0.78
MS4A1P11836 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
MS4A1P11836 AC010336.2-201ENST00000564226 506 ntBASIC19.94■□□□□ 0.78
MS4A1P11836 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.94■□□□□ 0.78
MS4A1P11836 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
MS4A1P11836 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.94■□□□□ 0.78
MS4A1P11836 AL158211.3-201ENST00000607385 239 ntBASIC19.94■□□□□ 0.78
MS4A1P11836 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.94■□□□□ 0.78
MS4A1P11836 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.94■□□□□ 0.78
MS4A1P11836 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A1P11836 AC087499.5-201ENST00000452760 1342 ntBASIC19.94■□□□□ 0.78
MS4A1P11836 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A1P11836 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A1P11836 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A1P11836 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A1P11836 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A1P11836 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A1P11836 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A1P11836 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MS4A1P11836 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A1P11836 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A1P11836 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A1P11836 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.93■□□□□ 0.78
MS4A1P11836 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A1P11836 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A1P11836 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A1P11836 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A1P11836 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19.93■□□□□ 0.78
MS4A1P11836 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC19.93■□□□□ 0.78
MS4A1P11836 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC19.93■□□□□ 0.78
MS4A1P11836 AJ011931.1-201ENST00000618749 2492 ntBASIC19.93■□□□□ 0.78
MS4A1P11836 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A1P11836 AC027369.6-201ENST00000525520 931 ntBASIC19.93■□□□□ 0.78
MS4A1P11836 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.93■□□□□ 0.78
MS4A1P11836 AL512361.1-201ENST00000554200 418 ntBASIC19.93■□□□□ 0.78
MS4A1P11836 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC19.93■□□□□ 0.78
MS4A1P11836 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A1P11836 AC079416.2-201ENST00000625035 1193 ntBASIC19.93■□□□□ 0.78
MS4A1P11836 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A1P11836 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A1P11836 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A1P11836 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A1P11836 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC19.93■□□□□ 0.78
MS4A1P11836 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A1P11836 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC19.93■□□□□ 0.78
MS4A1P11836 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MS4A1P11836 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC19.93■□□□□ 0.78
MS4A1P11836 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms