Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HOXC6P09630 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXC6P09630 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXC6P09630 LINC02447-202ENST00000501888 2146 ntBASIC17.33■□□□□ 0.36
HOXC6P09630 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXC6P09630 AC026691.1-201ENST00000602502 2017 ntBASIC17.33■□□□□ 0.36
HOXC6P09630 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
HOXC6P09630 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.33■□□□□ 0.36
HOXC6P09630 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HOXC6P09630 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HOXC6P09630 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
HOXC6P09630 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXC6P09630 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXC6P09630 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
HOXC6P09630 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.36
HOXC6P09630 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HOXC6P09630 DOC2GP-204ENST00000639052 2548 ntBASIC17.32■□□□□ 0.36
HOXC6P09630 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC6P09630 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC6P09630 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC6P09630 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXC6P09630 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HOXC6P09630 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC6P09630 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC6P09630 KRT8P4-201ENST00000509735 1454 ntBASIC17.32■□□□□ 0.36
HOXC6P09630 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXC6P09630 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
HOXC6P09630 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC6P09630 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HOXC6P09630 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC6P09630 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC6P09630 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC6P09630 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC6P09630 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC6P09630 AL133466.1-201ENST00000447582 150 ntBASIC17.32■□□□□ 0.36
HOXC6P09630 TMEM198B-204ENST00000484016 896 ntBASIC17.32■□□□□ 0.36
HOXC6P09630 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXC6P09630 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXC6P09630 RN7SL774P-201ENST00000577467 290 ntBASIC17.32■□□□□ 0.36
HOXC6P09630 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.32■□□□□ 0.36
HOXC6P09630 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC6P09630 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC6P09630 SNX1-214ENST00000625244 324 ntTSL 5 BASIC17.32■□□□□ 0.36
HOXC6P09630 AC128714.1-201ENST00000637035 887 ntBASIC17.32■□□□□ 0.36
HOXC6P09630 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
HOXC6P09630 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HOXC6P09630 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC6P09630 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC6P09630 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC6P09630 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXC6P09630 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC6P09630 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.32■□□□□ 0.36
HOXC6P09630 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HOXC6P09630 AC084364.1-201ENST00000551967 1556 ntBASIC17.32■□□□□ 0.36
HOXC6P09630 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.32■□□□□ 0.36
HOXC6P09630 AL513523.2-202ENST00000427283 2040 ntBASIC17.31■□□□□ 0.36
HOXC6P09630 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC6P09630 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.31■□□□□ 0.36
HOXC6P09630 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.31■□□□□ 0.36
HOXC6P09630 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
HOXC6P09630 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC6P09630 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC6P09630 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC6P09630 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC6P09630 DPM3-202ENST00000368399 517 ntBASIC17.31■□□□□ 0.36
HOXC6P09630 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC6P09630 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.31■□□□□ 0.36
HOXC6P09630 MAGEA5-201ENST00000446757 942 ntBASIC17.31■□□□□ 0.36
HOXC6P09630 MPRIPP1-201ENST00000452433 1089 ntBASIC17.31■□□□□ 0.36
HOXC6P09630 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.31■□□□□ 0.36
HOXC6P09630 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.31■□□□□ 0.36
HOXC6P09630 SAMD11P1-201ENST00000571429 661 ntBASIC17.31■□□□□ 0.36
HOXC6P09630 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HOXC6P09630 AC100757.4-201ENST00000626934 759 ntBASIC17.31■□□□□ 0.36
HOXC6P09630 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HOXC6P09630 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC6P09630 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC6P09630 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC6P09630 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC6P09630 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC6P09630 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.31■□□□□ 0.36
HOXC6P09630 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
HOXC6P09630 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC6P09630 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
HOXC6P09630 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HOXC6P09630 AC112504.1-201ENST00000623415 1841 ntBASIC17.31■□□□□ 0.36
HOXC6P09630 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.3■□□□□ 0.36
HOXC6P09630 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HOXC6P09630 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.3■□□□□ 0.36
HOXC6P09630 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC6P09630 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC6P09630 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC6P09630 KRT8P29-201ENST00000420409 1371 ntBASIC17.3■□□□□ 0.36
HOXC6P09630 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.3■□□□□ 0.36
HOXC6P09630 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC6P09630 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC6P09630 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC6P09630 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC6P09630 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC6P09630 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms