Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC11.86□□□□□ -0.51
TCRAP04437 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
TCRAP04437 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
TCRAP04437 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC11.86□□□□□ -0.51
TCRAP04437 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TCRAP04437 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
TCRAP04437 TNN-203ENST00000622870 3719 ntTSL 5 BASIC11.85□□□□□ -0.51
TCRAP04437 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
TCRAP04437 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC11.85□□□□□ -0.51
TCRAP04437 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
TCRAP04437 LINC01230-201ENST00000625222 3017 ntBASIC11.85□□□□□ -0.51
TCRAP04437 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
TCRAP04437 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
TCRAP04437 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
TCRAP04437 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC11.85□□□□□ -0.51
TCRAP04437 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
TCRAP04437 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.85□□□□□ -0.51
TCRAP04437 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.85□□□□□ -0.51
TCRAP04437 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.85□□□□□ -0.51
TCRAP04437 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 AC006504.5-208ENST00000588784 2401 ntBASIC11.85□□□□□ -0.51
TCRAP04437 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
TCRAP04437 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC11.85□□□□□ -0.51
TCRAP04437 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC11.85□□□□□ -0.51
TCRAP04437 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC11.85□□□□□ -0.51
TCRAP04437 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.85□□□□□ -0.51
TCRAP04437 KRT19P2-202ENST00000557173 1012 ntBASIC11.85□□□□□ -0.51
TCRAP04437 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.85□□□□□ -0.51
TCRAP04437 RARRES2P8-201ENST00000566335 367 ntBASIC11.85□□□□□ -0.51
TCRAP04437 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
TCRAP04437 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC11.85□□□□□ -0.51
TCRAP04437 NT5C-211ENST00000582170 653 ntTSL 3 BASIC11.85□□□□□ -0.51
TCRAP04437 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC11.85□□□□□ -0.51
TCRAP04437 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC11.85□□□□□ -0.51
TCRAP04437 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC11.85□□□□□ -0.51
TCRAP04437 AC068137.2-201ENST00000605408 478 ntBASIC11.85□□□□□ -0.51
TCRAP04437 MIR7706-201ENST00000613747 67 ntBASIC11.85□□□□□ -0.51
TCRAP04437 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
TCRAP04437 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
TCRAP04437 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
TCRAP04437 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
TCRAP04437 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC11.85□□□□□ -0.51
TCRAP04437 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 REM2-202ENST00000536884 1331 ntTSL 2 BASIC11.85□□□□□ -0.51
TCRAP04437 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TCRAP04437 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
TCRAP04437 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRAP04437 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRAP04437 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC11.84□□□□□ -0.51
TCRAP04437 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
TCRAP04437 AL607033.1-201ENST00000623900 1599 ntBASIC11.84□□□□□ -0.51
TCRAP04437 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TCRAP04437 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TCRAP04437 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.84□□□□□ -0.51
TCRAP04437 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
TCRAP04437 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRAP04437 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TCRAP04437 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TCRAP04437 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRAP04437 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRAP04437 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TCRAP04437 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
TCRAP04437 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC11.84□□□□□ -0.51
TCRAP04437 FAM220BP-201ENST00000377689 816 ntBASIC11.84□□□□□ -0.51
TCRAP04437 CSF3-203ENST00000394148 622 ntTSL 3 BASIC11.84□□□□□ -0.51
TCRAP04437 CBR1-202ENST00000399191 838 ntTSL 3 BASIC11.84□□□□□ -0.51
TCRAP04437 AC136604.1-201ENST00000418535 575 ntBASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms