Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDGFAP04085 NORAD-201ENST00000565493 5339 ntBASIC14.59□□□□□ -0.07
PDGFAP04085 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDGFAP04085 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PDGFAP04085 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDGFAP04085 AP002414.2-201ENST00000591780 3365 ntBASIC14.59□□□□□ -0.07
PDGFAP04085 AC020907.1-201ENST00000616460 1350 ntBASIC14.59□□□□□ -0.07
PDGFAP04085 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PDGFAP04085 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.58□□□□□ -0.07
PDGFAP04085 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PDGFAP04085 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.07
PDGFAP04085 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PDGFAP04085 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PDGFAP04085 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
PDGFAP04085 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
PDGFAP04085 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PDGFAP04085 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFAP04085 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
PDGFAP04085 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
PDGFAP04085 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
PDGFAP04085 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFAP04085 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFAP04085 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFAP04085 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFAP04085 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFAP04085 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.58□□□□□ -0.08
PDGFAP04085 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFAP04085 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
PDGFAP04085 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFAP04085 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFAP04085 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFAP04085 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.58□□□□□ -0.08
PDGFAP04085 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFAP04085 AC005229.1-201ENST00000392885 409 ntBASIC14.58□□□□□ -0.08
PDGFAP04085 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.58□□□□□ -0.08
PDGFAP04085 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.58□□□□□ -0.08
PDGFAP04085 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.58□□□□□ -0.08
PDGFAP04085 KRT18P64-201ENST00000434946 1219 ntBASIC14.58□□□□□ -0.08
PDGFAP04085 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.58□□□□□ -0.08
PDGFAP04085 RPL7P3-201ENST00000441388 714 ntBASIC14.58□□□□□ -0.08
PDGFAP04085 TARDBPP1-201ENST00000442013 1203 ntBASIC14.58□□□□□ -0.08
PDGFAP04085 AC099548.2-209ENST00000480264 625 ntBASIC14.58□□□□□ -0.08
PDGFAP04085 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.58□□□□□ -0.08
PDGFAP04085 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.58□□□□□ -0.08
PDGFAP04085 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.58□□□□□ -0.08
PDGFAP04085 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.58□□□□□ -0.08
PDGFAP04085 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFAP04085 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
PDGFAP04085 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFAP04085 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFAP04085 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFAP04085 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
PDGFAP04085 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.58□□□□□ -0.08
PDGFAP04085 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.58□□□□□ -0.08
PDGFAP04085 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFAP04085 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFAP04085 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFAP04085 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFAP04085 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFAP04085 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.58□□□□□ -0.08
PDGFAP04085 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFAP04085 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.58□□□□□ -0.08
PDGFAP04085 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFAP04085 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFAP04085 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
PDGFAP04085 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PDGFAP04085 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.57□□□□□ -0.08
PDGFAP04085 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PDGFAP04085 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.57□□□□□ -0.08
PDGFAP04085 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.57□□□□□ -0.08
PDGFAP04085 AC092933.1-201ENST00000393644 945 ntBASIC14.57□□□□□ -0.08
PDGFAP04085 AC004987.2-201ENST00000395959 1148 ntBASIC14.57□□□□□ -0.08
PDGFAP04085 HAUS4P1-201ENST00000406739 1145 ntBASIC14.57□□□□□ -0.08
PDGFAP04085 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.57□□□□□ -0.08
PDGFAP04085 EEF1DP4-201ENST00000446006 880 ntBASIC14.57□□□□□ -0.08
PDGFAP04085 FO681548.1-201ENST00000455617 1132 ntBASIC14.57□□□□□ -0.08
PDGFAP04085 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PDGFAP04085 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.57□□□□□ -0.08
PDGFAP04085 AC068587.3-201ENST00000526613 355 ntBASIC14.57□□□□□ -0.08
PDGFAP04085 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.57□□□□□ -0.08
PDGFAP04085 AC124283.3-201ENST00000570869 594 ntBASIC14.57□□□□□ -0.08
PDGFAP04085 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.57□□□□□ -0.08
PDGFAP04085 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.57□□□□□ -0.08
PDGFAP04085 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.57□□□□□ -0.08
PDGFAP04085 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.57□□□□□ -0.08
PDGFAP04085 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms