Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.3■□□□□ 0.2
LMNAP02545 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
LMNAP02545 CICP13-201ENST00000422015 2789 ntBASIC16.3■□□□□ 0.2
LMNAP02545 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LMNAP02545 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 FRMD8P1-201ENST00000440433 1524 ntBASIC16.29■□□□□ 0.2
LMNAP02545 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMNAP02545 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LMNAP02545 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMNAP02545 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LMNAP02545 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.29■□□□□ 0.2
LMNAP02545 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.29■□□□□ 0.2
LMNAP02545 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LMNAP02545 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
LMNAP02545 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMNAP02545 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LMNAP02545 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LMNAP02545 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.29■□□□□ 0.2
LMNAP02545 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LMNAP02545 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LMNAP02545 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LMNAP02545 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.29■□□□□ 0.2
LMNAP02545 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.29■□□□□ 0.2
LMNAP02545 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.29■□□□□ 0.2
LMNAP02545 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.29■□□□□ 0.2
LMNAP02545 SLC25A47P1-201ENST00000531577 414 ntBASIC16.29■□□□□ 0.2
LMNAP02545 MPDU1-223ENST00000582151 728 ntBASIC16.29■□□□□ 0.2
LMNAP02545 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.29■□□□□ 0.2
LMNAP02545 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMNAP02545 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.29■□□□□ 0.2
LMNAP02545 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMNAP02545 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.29■□□□□ 0.2
LMNAP02545 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.29■□□□□ 0.2
LMNAP02545 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMNAP02545 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
LMNAP02545 PPT1-215ENST00000641471 2368 ntBASIC16.29■□□□□ 0.2
LMNAP02545 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LMNAP02545 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.29■□□□□ 0.2
LMNAP02545 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMNAP02545 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LMNAP02545 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.29■□□□□ 0.2
LMNAP02545 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.29■□□□□ 0.2
LMNAP02545 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
LMNAP02545 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.29■□□□□ 0.2
LMNAP02545 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMNAP02545 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMNAP02545 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.29■□□□□ 0.2
LMNAP02545 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.29■□□□□ 0.2
LMNAP02545 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.28■□□□□ 0.2
LMNAP02545 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMNAP02545 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMNAP02545 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LMNAP02545 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LMNAP02545 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.28■□□□□ 0.2
LMNAP02545 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.28■□□□□ 0.2
LMNAP02545 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMNAP02545 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMNAP02545 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.28■□□□□ 0.2
LMNAP02545 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.28■□□□□ 0.2
LMNAP02545 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LMNAP02545 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMNAP02545 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMNAP02545 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMNAP02545 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMNAP02545 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LMNAP02545 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMNAP02545 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LMNAP02545 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
LMNAP02545 AC005229.1-201ENST00000392885 409 ntBASIC16.28■□□□□ 0.2
LMNAP02545 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMNAP02545 SLC25A24P2-201ENST00000415059 510 ntBASIC16.28■□□□□ 0.2
LMNAP02545 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
LMNAP02545 AL589987.1-201ENST00000453380 819 ntBASIC16.28■□□□□ 0.2
LMNAP02545 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.28■□□□□ 0.2
LMNAP02545 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.28■□□□□ 0.2
LMNAP02545 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.28■□□□□ 0.2
LMNAP02545 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.28■□□□□ 0.2
LMNAP02545 MIR4492-201ENST00000581627 80 ntBASIC16.28■□□□□ 0.2
LMNAP02545 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMNAP02545 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.28■□□□□ 0.2
LMNAP02545 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMNAP02545 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LMNAP02545 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.28■□□□□ 0.2
LMNAP02545 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMNAP02545 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.28■□□□□ 0.2
LMNAP02545 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMNAP02545 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LMNAP02545 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.28■□□□□ 0.2
LMNAP02545 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LMNAP02545 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms