Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.09■□□□□ 0.01
KRT6AP02538 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT6AP02538 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6AP02538 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
KRT6AP02538 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6AP02538 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.09■□□□□ 0.01
KRT6AP02538 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
KRT6AP02538 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6AP02538 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6AP02538 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT6AP02538 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.09■□□□□ 0.01
KRT6AP02538 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
KRT6AP02538 AP006288.1-201ENST00000446065 395 ntBASIC15.09■□□□□ 0.01
KRT6AP02538 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6AP02538 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.09■□□□□ 0.01
KRT6AP02538 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6AP02538 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT6AP02538 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT6AP02538 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT6AP02538 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.09■□□□□ 0.01
KRT6AP02538 SNHG9-202ENST00000564014 471 ntBASIC15.09■□□□□ 0.01
KRT6AP02538 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
KRT6AP02538 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6AP02538 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
KRT6AP02538 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6AP02538 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
KRT6AP02538 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT6AP02538 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT6AP02538 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.09■□□□□ 0.01
KRT6AP02538 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6AP02538 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6AP02538 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
KRT6AP02538 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6AP02538 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
KRT6AP02538 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT6AP02538 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT6AP02538 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
KRT6AP02538 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6AP02538 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6AP02538 AL122018.1-201ENST00000446607 2310 ntBASIC15.09■□□□□ 0.01
KRT6AP02538 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6AP02538 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6AP02538 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.08■□□□□ 0.01
KRT6AP02538 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
KRT6AP02538 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.08■□□□□ 0.01
KRT6AP02538 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.08■□□□□ 0.01
KRT6AP02538 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.08■□□□□ 0.01
KRT6AP02538 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
KRT6AP02538 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
KRT6AP02538 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
KRT6AP02538 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
KRT6AP02538 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.08■□□□□ 0
KRT6AP02538 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
KRT6AP02538 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.08■□□□□ 0
KRT6AP02538 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
KRT6AP02538 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.08■□□□□ 0
KRT6AP02538 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.08■□□□□ 0
KRT6AP02538 SLED1-202ENST00000512051 380 ntBASIC15.08■□□□□ 0
KRT6AP02538 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.08■□□□□ 0
KRT6AP02538 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.08■□□□□ 0
KRT6AP02538 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.08■□□□□ 0
KRT6AP02538 AL033527.5-202ENST00000641632 1098 ntBASIC15.08■□□□□ 0
KRT6AP02538 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
KRT6AP02538 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.08■□□□□ 0
KRT6AP02538 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
KRT6AP02538 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
KRT6AP02538 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.08■□□□□ 0
KRT6AP02538 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.08■□□□□ 0
KRT6AP02538 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
KRT6AP02538 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.08■□□□□ 0
KRT6AP02538 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
KRT6AP02538 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
KRT6AP02538 LINC01101-201ENST00000622953 1884 ntBASIC15.08■□□□□ 0
KRT6AP02538 AL009178.2-201ENST00000597278 2719 ntBASIC15.08■□□□□ 0
KRT6AP02538 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
KRT6AP02538 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
KRT6AP02538 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
KRT6AP02538 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
KRT6AP02538 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.07■□□□□ 0
KRT6AP02538 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.07■□□□□ 0
KRT6AP02538 SBF1P1-201ENST00000444527 5631 ntBASIC15.07■□□□□ 0
KRT6AP02538 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
KRT6AP02538 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
KRT6AP02538 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.07■□□□□ 0
KRT6AP02538 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.07■□□□□ 0
KRT6AP02538 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.07■□□□□ 0
KRT6AP02538 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.07■□□□□ 0
KRT6AP02538 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
KRT6AP02538 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
KRT6AP02538 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
KRT6AP02538 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
KRT6AP02538 AL080243.2-201ENST00000418783 582 ntBASIC15.07■□□□□ 0
KRT6AP02538 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.07■□□□□ 0
KRT6AP02538 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.07■□□□□ 0
KRT6AP02538 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.07■□□□□ 0
KRT6AP02538 AC069262.1-201ENST00000539058 672 ntBASIC15.07■□□□□ 0
KRT6AP02538 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.07■□□□□ 0
KRT6AP02538 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
KRT6AP02538 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.07■□□□□ 0
KRT6AP02538 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms