Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CD4P01730 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CD4P01730 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CD4P01730 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.02■□□□□ 0.32
CD4P01730 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD4P01730 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD4P01730 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CD4P01730 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.02■□□□□ 0.32
CD4P01730 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.02■□□□□ 0.32
CD4P01730 AC016700.1-201ENST00000429424 312 ntBASIC17.02■□□□□ 0.32
CD4P01730 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD4P01730 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.02■□□□□ 0.32
CD4P01730 MIR4722-201ENST00000578292 60 ntBASIC17.02■□□□□ 0.32
CD4P01730 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.02■□□□□ 0.32
CD4P01730 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.02■□□□□ 0.32
CD4P01730 AC097724.1-201ENST00000609581 426 ntBASIC17.02■□□□□ 0.32
CD4P01730 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.02■□□□□ 0.32
CD4P01730 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD4P01730 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD4P01730 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CD4P01730 AL513523.2-202ENST00000427283 2040 ntBASIC17.02■□□□□ 0.32
CD4P01730 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD4P01730 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.02■□□□□ 0.31
CD4P01730 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CD4P01730 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CD4P01730 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CD4P01730 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
CD4P01730 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.01■□□□□ 0.31
CD4P01730 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
CD4P01730 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
CD4P01730 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CD4P01730 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CD4P01730 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CD4P01730 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.01■□□□□ 0.31
CD4P01730 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.01■□□□□ 0.31
CD4P01730 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.01■□□□□ 0.31
CD4P01730 HINT2P1-201ENST00000419438 481 ntBASIC17.01■□□□□ 0.31
CD4P01730 AC079178.1-201ENST00000420915 656 ntBASIC17.01■□□□□ 0.31
CD4P01730 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.01■□□□□ 0.31
CD4P01730 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.01■□□□□ 0.31
CD4P01730 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.01■□□□□ 0.31
CD4P01730 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CD4P01730 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.01■□□□□ 0.31
CD4P01730 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 AC244157.2-201ENST00000616239 1006 ntBASIC17.01■□□□□ 0.31
CD4P01730 SNX1-214ENST00000625244 324 ntTSL 5 BASIC17.01■□□□□ 0.31
CD4P01730 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.01■□□□□ 0.31
CD4P01730 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.01■□□□□ 0.31
CD4P01730 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.01■□□□□ 0.31
CD4P01730 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CD4P01730 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.01■□□□□ 0.31
CD4P01730 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
CD4P01730 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD4P01730 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD4P01730 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD4P01730 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD4P01730 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD4P01730 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
CD4P01730 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CD4P01730 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17■□□□□ 0.31
CD4P01730 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17■□□□□ 0.31
CD4P01730 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD4P01730 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17■□□□□ 0.31
CD4P01730 CYP46A4P-201ENST00000414953 267 ntBASIC17■□□□□ 0.31
CD4P01730 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17■□□□□ 0.31
CD4P01730 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17■□□□□ 0.31
CD4P01730 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17■□□□□ 0.31
CD4P01730 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
CD4P01730 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD4P01730 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17■□□□□ 0.31
CD4P01730 IMP3P2-201ENST00000489760 475 ntBASIC17■□□□□ 0.31
CD4P01730 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17■□□□□ 0.31
CD4P01730 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD4P01730 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17■□□□□ 0.31
CD4P01730 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17■□□□□ 0.31
CD4P01730 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms