Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LTAP01374 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LTAP01374 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.71□□□□□ -0.53
LTAP01374 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LTAP01374 AC018442.1-201ENST00000421439 2061 ntBASIC11.71□□□□□ -0.53
LTAP01374 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
LTAP01374 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC11.71□□□□□ -0.53
LTAP01374 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
LTAP01374 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
LTAP01374 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LTAP01374 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LTAP01374 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LTAP01374 BSG-215ENST00000618006 1329 ntTSL 2 BASIC11.71□□□□□ -0.53
LTAP01374 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LTAP01374 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LTAP01374 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LTAP01374 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC11.71□□□□□ -0.53
LTAP01374 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LTAP01374 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC11.71□□□□□ -0.53
LTAP01374 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC11.71□□□□□ -0.53
LTAP01374 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LTAP01374 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LTAP01374 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC11.71□□□□□ -0.53
LTAP01374 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC11.71□□□□□ -0.53
LTAP01374 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
LTAP01374 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
LTAP01374 FAM215A-202ENST00000632077 792 ntBASIC11.71□□□□□ -0.53
LTAP01374 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LTAP01374 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LTAP01374 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC11.71□□□□□ -0.53
LTAP01374 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
LTAP01374 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC11.71□□□□□ -0.53
LTAP01374 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LTAP01374 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.71□□□□□ -0.54
LTAP01374 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LTAP01374 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
LTAP01374 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LTAP01374 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LTAP01374 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
LTAP01374 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
LTAP01374 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
LTAP01374 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
LTAP01374 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LTAP01374 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC11.71□□□□□ -0.54
LTAP01374 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
LTAP01374 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC11.71□□□□□ -0.54
LTAP01374 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
LTAP01374 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
LTAP01374 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC11.7□□□□□ -0.54
LTAP01374 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LTAP01374 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
LTAP01374 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LTAP01374 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LTAP01374 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC11.7□□□□□ -0.54
LTAP01374 MBLAC2-202ENST00000514906 1936 ntBASIC11.7□□□□□ -0.54
LTAP01374 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LTAP01374 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LTAP01374 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LTAP01374 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LTAP01374 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC11.7□□□□□ -0.54
LTAP01374 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LTAP01374 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LTAP01374 AC015802.1-201ENST00000588104 1449 ntBASIC11.7□□□□□ -0.54
LTAP01374 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC11.7□□□□□ -0.54
LTAP01374 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.7□□□□□ -0.54
LTAP01374 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC11.7□□□□□ -0.54
LTAP01374 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
LTAP01374 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LTAP01374 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC11.7□□□□□ -0.54
LTAP01374 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
LTAP01374 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LTAP01374 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LTAP01374 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
LTAP01374 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC11.7□□□□□ -0.54
LTAP01374 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
LTAP01374 FAM220BP-201ENST00000377689 816 ntBASIC11.7□□□□□ -0.54
LTAP01374 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
LTAP01374 AC009947.1-201ENST00000444350 727 ntBASIC11.7□□□□□ -0.54
LTAP01374 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC11.7□□□□□ -0.54
LTAP01374 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
LTAP01374 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.7□□□□□ -0.54
LTAP01374 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.7□□□□□ -0.54
LTAP01374 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LTAP01374 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LTAP01374 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC11.7□□□□□ -0.54
LTAP01374 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LTAP01374 IFNL4P1-201ENST00000607083 540 ntBASIC11.7□□□□□ -0.54
LTAP01374 AC026979.3-201ENST00000607315 403 ntBASIC11.7□□□□□ -0.54
LTAP01374 SERF2-217ENST00000630046 862 ntTSL 5 BASIC11.7□□□□□ -0.54
LTAP01374 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LTAP01374 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LTAP01374 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
LTAP01374 RDX-218ENST00000544551 4117 ntTSL 2 BASIC11.7□□□□□ -0.54
LTAP01374 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LTAP01374 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
LTAP01374 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LTAP01374 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LTAP01374 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
LTAP01374 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
LTAP01374 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms