Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTDNEP1O95476 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.89■□□□□ 0.45
CTDNEP1O95476 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDNEP1O95476 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTDNEP1O95476 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CTDNEP1O95476 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDNEP1O95476 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.88■□□□□ 0.45
CTDNEP1O95476 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDNEP1O95476 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTDNEP1O95476 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDNEP1O95476 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CTDNEP1O95476 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDNEP1O95476 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDNEP1O95476 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDNEP1O95476 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTDNEP1O95476 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CTDNEP1O95476 AC007787.1-201ENST00000588095 1583 ntBASIC17.88■□□□□ 0.45
CTDNEP1O95476 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CTDNEP1O95476 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDNEP1O95476 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDNEP1O95476 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CTDNEP1O95476 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.88■□□□□ 0.45
CTDNEP1O95476 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.88■□□□□ 0.45
CTDNEP1O95476 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDNEP1O95476 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CTDNEP1O95476 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDNEP1O95476 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDNEP1O95476 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.88■□□□□ 0.45
CTDNEP1O95476 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CTDNEP1O95476 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDNEP1O95476 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CTDNEP1O95476 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.88■□□□□ 0.45
CTDNEP1O95476 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.88■□□□□ 0.45
CTDNEP1O95476 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTDNEP1O95476 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.88■□□□□ 0.45
CTDNEP1O95476 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.88■□□□□ 0.45
CTDNEP1O95476 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.88■□□□□ 0.45
CTDNEP1O95476 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.88■□□□□ 0.45
CTDNEP1O95476 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.88■□□□□ 0.45
CTDNEP1O95476 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CTDNEP1O95476 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.88■□□□□ 0.45
CTDNEP1O95476 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTDNEP1O95476 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDNEP1O95476 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDNEP1O95476 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.88■□□□□ 0.45
CTDNEP1O95476 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDNEP1O95476 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDNEP1O95476 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.88■□□□□ 0.45
CTDNEP1O95476 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CTDNEP1O95476 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.87■□□□□ 0.45
CTDNEP1O95476 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CTDNEP1O95476 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CTDNEP1O95476 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.87■□□□□ 0.45
CTDNEP1O95476 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTDNEP1O95476 AC023908.3-201ENST00000564211 3047 ntBASIC17.87■□□□□ 0.45
CTDNEP1O95476 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTDNEP1O95476 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CTDNEP1O95476 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTDNEP1O95476 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.87■□□□□ 0.45
CTDNEP1O95476 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.87■□□□□ 0.45
CTDNEP1O95476 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.87■□□□□ 0.45
CTDNEP1O95476 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.87■□□□□ 0.45
CTDNEP1O95476 SERBP1P5-201ENST00000510079 1181 ntBASIC17.87■□□□□ 0.45
CTDNEP1O95476 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.87■□□□□ 0.45
CTDNEP1O95476 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.87■□□□□ 0.45
CTDNEP1O95476 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.87■□□□□ 0.45
CTDNEP1O95476 AC107373.2-201ENST00000607735 490 ntBASIC17.87■□□□□ 0.45
CTDNEP1O95476 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.87■□□□□ 0.45
CTDNEP1O95476 AL360270.3-201ENST00000609118 1348 ntBASIC17.87■□□□□ 0.45
CTDNEP1O95476 AC093525.8-201ENST00000624099 1342 ntBASIC17.87■□□□□ 0.45
CTDNEP1O95476 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.87■□□□□ 0.45
CTDNEP1O95476 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTDNEP1O95476 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTDNEP1O95476 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTDNEP1O95476 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
CTDNEP1O95476 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CTDNEP1O95476 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTDNEP1O95476 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTDNEP1O95476 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.87■□□□□ 0.45
CTDNEP1O95476 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CTDNEP1O95476 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTDNEP1O95476 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTDNEP1O95476 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
CTDNEP1O95476 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTDNEP1O95476 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTDNEP1O95476 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTDNEP1O95476 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTDNEP1O95476 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTDNEP1O95476 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CTDNEP1O95476 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.86■□□□□ 0.45
CTDNEP1O95476 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.86■□□□□ 0.45
CTDNEP1O95476 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.86■□□□□ 0.45
CTDNEP1O95476 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTDNEP1O95476 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTDNEP1O95476 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.86■□□□□ 0.45
CTDNEP1O95476 AC098850.1-201ENST00000419919 790 ntBASIC17.86■□□□□ 0.45
CTDNEP1O95476 HLA-K-203ENST00000430151 1046 ntBASIC17.86■□□□□ 0.45
CTDNEP1O95476 VDAC1P7-201ENST00000462417 847 ntBASIC17.86■□□□□ 0.45
CTDNEP1O95476 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.86■□□□□ 0.45
CTDNEP1O95476 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms