Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.03■□□□□ 0.8
LTN1O94822 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LTN1O94822 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LTN1O94822 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
LTN1O94822 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LTN1O94822 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.03■□□□□ 0.8
LTN1O94822 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LTN1O94822 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
LTN1O94822 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.03■□□□□ 0.8
LTN1O94822 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LTN1O94822 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC20.03■□□□□ 0.8
LTN1O94822 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LTN1O94822 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC20.03■□□□□ 0.8
LTN1O94822 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LTN1O94822 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LTN1O94822 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC20.03■□□□□ 0.8
LTN1O94822 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC20.03■□□□□ 0.8
LTN1O94822 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LTN1O94822 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC20.03■□□□□ 0.8
LTN1O94822 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LTN1O94822 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC20.03■□□□□ 0.8
LTN1O94822 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC20.03■□□□□ 0.8
LTN1O94822 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LTN1O94822 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LTN1O94822 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LTN1O94822 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LTN1O94822 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LTN1O94822 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LTN1O94822 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LTN1O94822 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC20.02■□□□□ 0.8
LTN1O94822 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
LTN1O94822 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LTN1O94822 MVK-214ENST00000629016 1591 ntTSL 5 BASIC20.02■□□□□ 0.8
LTN1O94822 AMT-239ENST00000636865 1914 ntTSL 5 BASIC20.02■□□□□ 0.8
LTN1O94822 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LTN1O94822 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC20.02■□□□□ 0.8
LTN1O94822 Z97180.1-201ENST00000445173 988 ntBASIC20.02■□□□□ 0.8
LTN1O94822 RPL18P13-201ENST00000478088 569 ntBASIC20.02■□□□□ 0.8
LTN1O94822 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC20.02■□□□□ 0.8
LTN1O94822 IGLV3-15-201ENST00000518356 244 ntBASIC20.02■□□□□ 0.8
LTN1O94822 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC20.02■□□□□ 0.8
LTN1O94822 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC20.02■□□□□ 0.8
LTN1O94822 AC008805.1-201ENST00000590892 364 ntBASIC20.02■□□□□ 0.8
LTN1O94822 MIR6727-201ENST00000620702 65 ntBASIC20.02■□□□□ 0.8
LTN1O94822 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LTN1O94822 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC20.02■□□□□ 0.8
LTN1O94822 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LTN1O94822 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LTN1O94822 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
LTN1O94822 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LTN1O94822 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
LTN1O94822 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC20.02■□□□□ 0.79
LTN1O94822 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
LTN1O94822 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LTN1O94822 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
LTN1O94822 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LTN1O94822 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC20.02■□□□□ 0.79
LTN1O94822 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LTN1O94822 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LTN1O94822 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
LTN1O94822 AC026691.1-201ENST00000602502 2017 ntBASIC20.01■□□□□ 0.79
LTN1O94822 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LTN1O94822 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LTN1O94822 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC20.01■□□□□ 0.79
LTN1O94822 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LTN1O94822 AL645933.1-201ENST00000440087 609 ntBASIC20.01■□□□□ 0.79
LTN1O94822 AC253536.4-201ENST00000440539 267 ntBASIC20.01■□□□□ 0.79
LTN1O94822 AC100827.2-201ENST00000563214 1194 ntBASIC20.01■□□□□ 0.79
LTN1O94822 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LTN1O94822 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC20.01■□□□□ 0.79
LTN1O94822 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
LTN1O94822 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LTN1O94822 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LTN1O94822 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
LTN1O94822 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
LTN1O94822 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC20.01■□□□□ 0.79
LTN1O94822 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LTN1O94822 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LTN1O94822 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
LTN1O94822 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.01■□□□□ 0.79
LTN1O94822 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC20.01■□□□□ 0.79
LTN1O94822 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
LTN1O94822 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC20.01■□□□□ 0.79
LTN1O94822 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
LTN1O94822 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LTN1O94822 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC20■□□□□ 0.79
LTN1O94822 IGF1-203ENST00000392904 761 ntTSL 5 BASIC20■□□□□ 0.79
LTN1O94822 LBH-202ENST00000401506 485 ntTSL 3 BASIC20■□□□□ 0.79
LTN1O94822 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LTN1O94822 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC20■□□□□ 0.79
LTN1O94822 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC20■□□□□ 0.79
LTN1O94822 SNORD3B-2-202ENST00000571722 791 ntBASIC20■□□□□ 0.79
LTN1O94822 MIR4754-201ENST00000582477 89 ntBASIC20■□□□□ 0.79
LTN1O94822 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC20■□□□□ 0.79
LTN1O94822 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC20■□□□□ 0.79
LTN1O94822 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LTN1O94822 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC20■□□□□ 0.79
LTN1O94822 STRN-202ENST00000379213 2254 ntTSL 5 BASIC20■□□□□ 0.79
LTN1O94822 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC20■□□□□ 0.79
LTN1O94822 AC092978.1-202ENST00000637590 1327 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms