Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
CEACAM4O75871 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.9□□□□□ -0.18
CEACAM4O75871 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CEACAM4O75871 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.9□□□□□ -0.18
CEACAM4O75871 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 AC011742.3-201ENST00000439053 820 ntBASIC13.9□□□□□ -0.18
CEACAM4O75871 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.9□□□□□ -0.18
CEACAM4O75871 AC021723.1-201ENST00000486306 515 ntBASIC13.9□□□□□ -0.18
CEACAM4O75871 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 AC106794.1-201ENST00000506935 792 ntBASIC13.9□□□□□ -0.18
CEACAM4O75871 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.9□□□□□ -0.18
CEACAM4O75871 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.9□□□□□ -0.18
CEACAM4O75871 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.9□□□□□ -0.18
CEACAM4O75871 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.9□□□□□ -0.18
CEACAM4O75871 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
CEACAM4O75871 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.9□□□□□ -0.18
CEACAM4O75871 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CEACAM4O75871 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CEACAM4O75871 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.9□□□□□ -0.18
CEACAM4O75871 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
CEACAM4O75871 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.9□□□□□ -0.18
CEACAM4O75871 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CEACAM4O75871 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CEACAM4O75871 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CEACAM4O75871 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.9□□□□□ -0.19
CEACAM4O75871 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CEACAM4O75871 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CEACAM4O75871 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM4O75871 NKILA-202ENST00000614771 2598 ntBASIC13.89□□□□□ -0.19
CEACAM4O75871 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM4O75871 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM4O75871 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM4O75871 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM4O75871 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM4O75871 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM4O75871 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM4O75871 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM4O75871 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM4O75871 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM4O75871 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM4O75871 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM4O75871 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.89□□□□□ -0.19
CEACAM4O75871 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CEACAM4O75871 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.89□□□□□ -0.19
CEACAM4O75871 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.89□□□□□ -0.19
CEACAM4O75871 FXNP2-201ENST00000411625 547 ntBASIC13.89□□□□□ -0.19
CEACAM4O75871 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.89□□□□□ -0.19
CEACAM4O75871 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.89□□□□□ -0.19
CEACAM4O75871 TMEM198B-204ENST00000484016 896 ntBASIC13.89□□□□□ -0.19
CEACAM4O75871 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.89□□□□□ -0.19
CEACAM4O75871 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM4O75871 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.89□□□□□ -0.19
CEACAM4O75871 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM4O75871 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.89□□□□□ -0.19
CEACAM4O75871 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.89□□□□□ -0.19
CEACAM4O75871 MIR4722-201ENST00000578292 60 ntBASIC13.89□□□□□ -0.19
CEACAM4O75871 AC005324.6-201ENST00000587972 613 ntBASIC13.89□□□□□ -0.19
CEACAM4O75871 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CEACAM4O75871 AC026740.1-201ENST00000607068 791 ntBASIC13.89□□□□□ -0.19
CEACAM4O75871 AC091544.8-201ENST00000619490 361 ntBASIC13.89□□□□□ -0.19
CEACAM4O75871 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.89□□□□□ -0.19
CEACAM4O75871 AC128714.1-201ENST00000637035 887 ntBASIC13.89□□□□□ -0.19
CEACAM4O75871 AC004923.1-202ENST00000642106 209 ntBASIC13.89□□□□□ -0.19
CEACAM4O75871 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.89□□□□□ -0.19
CEACAM4O75871 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
CEACAM4O75871 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM4O75871 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CEACAM4O75871 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM4O75871 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM4O75871 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM4O75871 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
CEACAM4O75871 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.89□□□□□ -0.19
CEACAM4O75871 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.89□□□□□ -0.19
CEACAM4O75871 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM4O75871 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CEACAM4O75871 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CEACAM4O75871 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms