Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.41■□□□□ 0.38
ACTN4O43707 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ACTN4O43707 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ACTN4O43707 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN4O43707 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ACTN4O43707 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN4O43707 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.4■□□□□ 0.38
ACTN4O43707 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN4O43707 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
ACTN4O43707 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.4■□□□□ 0.38
ACTN4O43707 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN4O43707 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ACTN4O43707 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ACTN4O43707 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN4O43707 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN4O43707 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN4O43707 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
ACTN4O43707 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN4O43707 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.4■□□□□ 0.38
ACTN4O43707 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.4■□□□□ 0.38
ACTN4O43707 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.4■□□□□ 0.38
ACTN4O43707 KRT18P43-201ENST00000469825 1281 ntBASIC17.4■□□□□ 0.38
ACTN4O43707 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.4■□□□□ 0.38
ACTN4O43707 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.4■□□□□ 0.38
ACTN4O43707 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.4■□□□□ 0.38
ACTN4O43707 SDHAP3-202ENST00000515467 728 ntBASIC17.4■□□□□ 0.38
ACTN4O43707 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.4■□□□□ 0.38
ACTN4O43707 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.4■□□□□ 0.38
ACTN4O43707 ZNF890P-202ENST00000530367 1156 ntBASIC17.4■□□□□ 0.38
ACTN4O43707 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.4■□□□□ 0.38
ACTN4O43707 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.4■□□□□ 0.38
ACTN4O43707 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.4■□□□□ 0.38
ACTN4O43707 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ACTN4O43707 AC093028.1-201ENST00000622998 982 ntBASIC17.4■□□□□ 0.38
ACTN4O43707 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
ACTN4O43707 REXO1L4P-201ENST00000605109 1937 ntBASIC17.4■□□□□ 0.38
ACTN4O43707 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ACTN4O43707 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN4O43707 LINC00552-201ENST00000625151 2579 ntBASIC17.4■□□□□ 0.38
ACTN4O43707 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN4O43707 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.4■□□□□ 0.38
ACTN4O43707 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN4O43707 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN4O43707 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.4■□□□□ 0.38
ACTN4O43707 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN4O43707 AC087499.5-201ENST00000452760 1342 ntBASIC17.4■□□□□ 0.38
ACTN4O43707 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN4O43707 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN4O43707 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.4■□□□□ 0.38
ACTN4O43707 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN4O43707 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN4O43707 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN4O43707 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ACTN4O43707 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.4■□□□□ 0.38
ACTN4O43707 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN4O43707 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.4■□□□□ 0.38
ACTN4O43707 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ACTN4O43707 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN4O43707 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ACTN4O43707 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.39■□□□□ 0.38
ACTN4O43707 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.39■□□□□ 0.38
ACTN4O43707 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.39■□□□□ 0.38
ACTN4O43707 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ACTN4O43707 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
ACTN4O43707 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ACTN4O43707 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
ACTN4O43707 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.39■□□□□ 0.37
ACTN4O43707 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.39■□□□□ 0.37
ACTN4O43707 AC023908.3-201ENST00000564211 3047 ntBASIC17.39■□□□□ 0.37
ACTN4O43707 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.39■□□□□ 0.37
ACTN4O43707 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ACTN4O43707 AC107890.1-201ENST00000422478 521 ntBASIC17.39■□□□□ 0.37
ACTN4O43707 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.39■□□□□ 0.37
ACTN4O43707 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.39■□□□□ 0.37
ACTN4O43707 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ACTN4O43707 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.39■□□□□ 0.37
ACTN4O43707 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.39■□□□□ 0.37
ACTN4O43707 AC027369.6-201ENST00000525520 931 ntBASIC17.39■□□□□ 0.37
ACTN4O43707 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.39■□□□□ 0.37
ACTN4O43707 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.39■□□□□ 0.37
ACTN4O43707 AC025678.2-201ENST00000562061 970 ntBASIC17.39■□□□□ 0.37
ACTN4O43707 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.39■□□□□ 0.37
ACTN4O43707 AP001160.2-201ENST00000596071 487 ntBASIC17.39■□□□□ 0.37
ACTN4O43707 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.39■□□□□ 0.37
ACTN4O43707 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
ACTN4O43707 AL645728.2-202ENST00000641679 227 ntBASIC17.39■□□□□ 0.37
ACTN4O43707 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ACTN4O43707 AC007292.2-201ENST00000593524 1812 ntBASIC17.39■□□□□ 0.37
ACTN4O43707 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ACTN4O43707 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ACTN4O43707 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ACTN4O43707 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ACTN4O43707 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ACTN4O43707 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ACTN4O43707 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ACTN4O43707 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms