Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PHGDHO43175 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.48■□□□□ 0.07
PHGDHO43175 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PHGDHO43175 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PHGDHO43175 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PHGDHO43175 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.48■□□□□ 0.07
PHGDHO43175 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PHGDHO43175 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PHGDHO43175 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PHGDHO43175 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
PHGDHO43175 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PHGDHO43175 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PHGDHO43175 RPL5P21-201ENST00000404620 815 ntBASIC15.48■□□□□ 0.07
PHGDHO43175 AC211486.1-202ENST00000416371 468 ntBASIC15.48■□□□□ 0.07
PHGDHO43175 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.48■□□□□ 0.07
PHGDHO43175 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.48■□□□□ 0.07
PHGDHO43175 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.48■□□□□ 0.07
PHGDHO43175 AC211476.1-201ENST00000503899 468 ntBASIC15.48■□□□□ 0.07
PHGDHO43175 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PHGDHO43175 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PHGDHO43175 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.48■□□□□ 0.07
PHGDHO43175 AL589739.1-201ENST00000607720 493 ntBASIC15.48■□□□□ 0.07
PHGDHO43175 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PHGDHO43175 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PHGDHO43175 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PHGDHO43175 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
PHGDHO43175 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PHGDHO43175 SNX18-202ENST00000343017 3140 ntBASIC15.48■□□□□ 0.07
PHGDHO43175 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PHGDHO43175 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PHGDHO43175 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PHGDHO43175 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PHGDHO43175 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.48■□□□□ 0.07
PHGDHO43175 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PHGDHO43175 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
PHGDHO43175 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.48■□□□□ 0.07
PHGDHO43175 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.48■□□□□ 0.07
PHGDHO43175 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.48■□□□□ 0.07
PHGDHO43175 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PHGDHO43175 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PHGDHO43175 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
PHGDHO43175 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PHGDHO43175 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PHGDHO43175 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PHGDHO43175 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PHGDHO43175 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.47■□□□□ 0.07
PHGDHO43175 LINC00552-201ENST00000625151 2579 ntBASIC15.47■□□□□ 0.07
PHGDHO43175 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.47■□□□□ 0.07
PHGDHO43175 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PHGDHO43175 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
PHGDHO43175 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PHGDHO43175 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.47■□□□□ 0.07
PHGDHO43175 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PHGDHO43175 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PHGDHO43175 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.47■□□□□ 0.07
PHGDHO43175 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
PHGDHO43175 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PHGDHO43175 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PHGDHO43175 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PHGDHO43175 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PHGDHO43175 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PHGDHO43175 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.47■□□□□ 0.07
PHGDHO43175 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
PHGDHO43175 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
PHGDHO43175 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PHGDHO43175 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PHGDHO43175 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.47■□□□□ 0.07
PHGDHO43175 AL080243.2-201ENST00000418783 582 ntBASIC15.47■□□□□ 0.07
PHGDHO43175 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.47■□□□□ 0.07
PHGDHO43175 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.47■□□□□ 0.07
PHGDHO43175 KRT18P64-201ENST00000434946 1219 ntBASIC15.47■□□□□ 0.07
PHGDHO43175 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PHGDHO43175 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.47■□□□□ 0.07
PHGDHO43175 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PHGDHO43175 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.47■□□□□ 0.07
PHGDHO43175 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.47■□□□□ 0.07
PHGDHO43175 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.47■□□□□ 0.07
PHGDHO43175 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PHGDHO43175 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PHGDHO43175 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.47■□□□□ 0.07
PHGDHO43175 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.47■□□□□ 0.07
PHGDHO43175 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PHGDHO43175 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.47■□□□□ 0.07
PHGDHO43175 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.47■□□□□ 0.07
PHGDHO43175 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.47■□□□□ 0.07
PHGDHO43175 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.47■□□□□ 0.07
PHGDHO43175 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.47■□□□□ 0.07
PHGDHO43175 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
PHGDHO43175 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PHGDHO43175 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.47■□□□□ 0.07
PHGDHO43175 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.47■□□□□ 0.07
PHGDHO43175 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
PHGDHO43175 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PHGDHO43175 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PHGDHO43175 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PHGDHO43175 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.47■□□□□ 0.07
PHGDHO43175 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PHGDHO43175 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PHGDHO43175 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PHGDHO43175 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms