Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLOCKO15516 AC025580.3-201ENST00000617932 1424 ntBASIC14.83□□□□□ -0.03
CLOCKO15516 AC079781.5-202ENST00000641784 3743 ntBASIC14.83□□□□□ -0.03
CLOCKO15516 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLOCKO15516 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.83□□□□□ -0.03
CLOCKO15516 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CLOCKO15516 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
CLOCKO15516 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CLOCKO15516 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLOCKO15516 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLOCKO15516 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.83□□□□□ -0.04
CLOCKO15516 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLOCKO15516 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLOCKO15516 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.83□□□□□ -0.04
CLOCKO15516 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CLOCKO15516 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLOCKO15516 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLOCKO15516 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.83□□□□□ -0.04
CLOCKO15516 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLOCKO15516 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLOCKO15516 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.83□□□□□ -0.04
CLOCKO15516 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLOCKO15516 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.83□□□□□ -0.04
CLOCKO15516 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.83□□□□□ -0.04
CLOCKO15516 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CLOCKO15516 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLOCKO15516 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLOCKO15516 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLOCKO15516 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLOCKO15516 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.83□□□□□ -0.04
CLOCKO15516 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.83□□□□□ -0.04
CLOCKO15516 CEND1P1-201ENST00000451006 455 ntBASIC14.83□□□□□ -0.04
CLOCKO15516 KRT18P34-201ENST00000488218 1270 ntBASIC14.83□□□□□ -0.04
CLOCKO15516 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.83□□□□□ -0.04
CLOCKO15516 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.83□□□□□ -0.04
CLOCKO15516 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CLOCKO15516 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.83□□□□□ -0.04
CLOCKO15516 KRT19P2-202ENST00000557173 1012 ntBASIC14.83□□□□□ -0.04
CLOCKO15516 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.83□□□□□ -0.04
CLOCKO15516 PDPK2P-202ENST00000562415 1191 ntBASIC14.83□□□□□ -0.04
CLOCKO15516 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
CLOCKO15516 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.83□□□□□ -0.04
CLOCKO15516 AC023141.13-201ENST00000604991 943 ntBASIC14.83□□□□□ -0.04
CLOCKO15516 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.83□□□□□ -0.04
CLOCKO15516 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.83□□□□□ -0.04
CLOCKO15516 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.83□□□□□ -0.04
CLOCKO15516 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLOCKO15516 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CLOCKO15516 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLOCKO15516 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CLOCKO15516 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLOCKO15516 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLOCKO15516 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.83□□□□□ -0.04
CLOCKO15516 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CLOCKO15516 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.83□□□□□ -0.04
CLOCKO15516 AC140479.7-201ENST00000636301 2332 ntBASIC14.83□□□□□ -0.04
CLOCKO15516 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLOCKO15516 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLOCKO15516 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CLOCKO15516 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.83□□□□□ -0.04
CLOCKO15516 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLOCKO15516 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLOCKO15516 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLOCKO15516 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLOCKO15516 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLOCKO15516 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLOCKO15516 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLOCKO15516 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
CLOCKO15516 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLOCKO15516 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLOCKO15516 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLOCKO15516 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLOCKO15516 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLOCKO15516 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLOCKO15516 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLOCKO15516 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLOCKO15516 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
CLOCKO15516 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLOCKO15516 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLOCKO15516 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLOCKO15516 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLOCKO15516 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.82□□□□□ -0.04
CLOCKO15516 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLOCKO15516 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLOCKO15516 AL645939.2-201ENST00000427340 991 ntBASIC14.82□□□□□ -0.04
CLOCKO15516 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.82□□□□□ -0.04
CLOCKO15516 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLOCKO15516 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLOCKO15516 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.82□□□□□ -0.04
CLOCKO15516 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.82□□□□□ -0.04
CLOCKO15516 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.82□□□□□ -0.04
CLOCKO15516 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.82□□□□□ -0.04
CLOCKO15516 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLOCKO15516 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLOCKO15516 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.82□□□□□ -0.04
CLOCKO15516 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLOCKO15516 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.82□□□□□ -0.04
CLOCKO15516 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLOCKO15516 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLOCKO15516 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms