Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3B1O00203 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP3B1O00203 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.71■□□□□ 0.11
AP3B1O00203 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.71■□□□□ 0.11
AP3B1O00203 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
AP3B1O00203 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP3B1O00203 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP3B1O00203 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.71■□□□□ 0.11
AP3B1O00203 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3B1O00203 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3B1O00203 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.71■□□□□ 0.11
AP3B1O00203 AC107890.1-201ENST00000422478 521 ntBASIC15.71■□□□□ 0.11
AP3B1O00203 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.71■□□□□ 0.11
AP3B1O00203 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.71■□□□□ 0.11
AP3B1O00203 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.71■□□□□ 0.11
AP3B1O00203 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
AP3B1O00203 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.71■□□□□ 0.11
AP3B1O00203 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
AP3B1O00203 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.71■□□□□ 0.11
AP3B1O00203 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.71■□□□□ 0.11
AP3B1O00203 AL158211.3-201ENST00000607385 239 ntBASIC15.71■□□□□ 0.11
AP3B1O00203 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.71■□□□□ 0.11
AP3B1O00203 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP3B1O00203 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
AP3B1O00203 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3B1O00203 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.71■□□□□ 0.11
AP3B1O00203 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3B1O00203 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.71■□□□□ 0.11
AP3B1O00203 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3B1O00203 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3B1O00203 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
AP3B1O00203 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP3B1O00203 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP3B1O00203 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
AP3B1O00203 LINC02228-204ENST00000642115 2962 ntBASIC15.71■□□□□ 0.11
AP3B1O00203 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
AP3B1O00203 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
AP3B1O00203 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
AP3B1O00203 AC012508.2-201ENST00000567613 1472 ntBASIC15.71■□□□□ 0.1
AP3B1O00203 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
AP3B1O00203 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
AP3B1O00203 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
AP3B1O00203 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.1
AP3B1O00203 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
AP3B1O00203 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.71■□□□□ 0.1
AP3B1O00203 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
AP3B1O00203 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
AP3B1O00203 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3B1O00203 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3B1O00203 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3B1O00203 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3B1O00203 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3B1O00203 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3B1O00203 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3B1O00203 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3B1O00203 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.7■□□□□ 0.1
AP3B1O00203 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
AP3B1O00203 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP3B1O00203 FAM45BP-202ENST00000592932 1624 ntBASIC15.7■□□□□ 0.1
AP3B1O00203 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.7■□□□□ 0.1
AP3B1O00203 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
AP3B1O00203 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3B1O00203 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3B1O00203 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
AP3B1O00203 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.7■□□□□ 0.1
AP3B1O00203 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.7■□□□□ 0.1
AP3B1O00203 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP3B1O00203 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP3B1O00203 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.7■□□□□ 0.1
AP3B1O00203 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.7■□□□□ 0.1
AP3B1O00203 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.7■□□□□ 0.1
AP3B1O00203 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.7■□□□□ 0.1
AP3B1O00203 AC027369.6-201ENST00000525520 931 ntBASIC15.7■□□□□ 0.1
AP3B1O00203 TIMM17BP1-201ENST00000545713 516 ntBASIC15.7■□□□□ 0.1
AP3B1O00203 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
AP3B1O00203 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.7■□□□□ 0.1
AP3B1O00203 AL512361.1-201ENST00000554200 418 ntBASIC15.7■□□□□ 0.1
AP3B1O00203 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.7■□□□□ 0.1
AP3B1O00203 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.7■□□□□ 0.1
AP3B1O00203 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.7■□□□□ 0.1
AP3B1O00203 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.7■□□□□ 0.1
AP3B1O00203 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3B1O00203 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3B1O00203 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.7■□□□□ 0.1
AP3B1O00203 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3B1O00203 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3B1O00203 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP3B1O00203 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
AP3B1O00203 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3B1O00203 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
AP3B1O00203 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
AP3B1O00203 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
AP3B1O00203 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP3B1O00203 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP3B1O00203 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP3B1O00203 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.69■□□□□ 0.1
AP3B1O00203 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3B1O00203 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP3B1O00203 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.69■□□□□ 0.1
AP3B1O00203 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms