Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 TOMM22P5-201ENST00000416399 439 ntBASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 AL359711.2-201ENST00000563105 872 ntBASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 AL607033.1-201ENST00000623900 1599 ntBASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA2E9PIF3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 AC136604.1-201ENST00000418535 575 ntBASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 AC134915.1-201ENST00000426461 574 ntBASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 AC022210.1-201ENST00000449856 793 ntBASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 AC068418.2-201ENST00000577309 3703 ntBASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NPIPA2E9PIF3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
NPIPA2E9PIF3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.14□□□□□ -0.15
NPIPA2E9PIF3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms