Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 AL732292.2-201ENST00000609649 430 ntBASIC10.92□□□□□ -0.66
LINC01546A6NGU7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 FOXO1B-201ENST00000504678 1527 ntBASIC10.92□□□□□ -0.66
LINC01546A6NGU7 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 CETP-203ENST00000566128 1733 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 AC068760.1-201ENST00000493579 1953 ntBASIC10.92□□□□□ -0.66
LINC01546A6NGU7 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01546A6NGU7 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 AL356488.2-201ENST00000602755 427 ntBASIC10.91□□□□□ -0.66
LINC01546A6NGU7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC10.91□□□□□ -0.66
LINC01546A6NGU7 AC018665.1-201ENST00000622927 1362 ntBASIC10.9□□□□□ -0.66
LINC01546A6NGU7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 MYO15B-237ENST00000642007 4893 ntBASIC10.9□□□□□ -0.66
LINC01546A6NGU7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01546A6NGU7 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms