Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SBNO1A3KN83 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SBNO1A3KN83 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SBNO1A3KN83 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SBNO1A3KN83 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.63■□□□□ 0.89
SBNO1A3KN83 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC20.63■□□□□ 0.89
SBNO1A3KN83 RN7SKP214-201ENST00000364208 315 ntBASIC20.63■□□□□ 0.89
SBNO1A3KN83 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SBNO1A3KN83 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SBNO1A3KN83 RPSAP31-201ENST00000416648 895 ntBASIC20.63■□□□□ 0.89
SBNO1A3KN83 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SBNO1A3KN83 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC20.63■□□□□ 0.89
SBNO1A3KN83 AL136301.1-201ENST00000615830 422 ntBASIC20.63■□□□□ 0.89
SBNO1A3KN83 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SBNO1A3KN83 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SBNO1A3KN83 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SBNO1A3KN83 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC20.63■□□□□ 0.89
SBNO1A3KN83 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SBNO1A3KN83 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SBNO1A3KN83 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SBNO1A3KN83 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
SBNO1A3KN83 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC20.63■□□□□ 0.89
SBNO1A3KN83 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SBNO1A3KN83 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SBNO1A3KN83 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SBNO1A3KN83 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.63■□□□□ 0.89
SBNO1A3KN83 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SBNO1A3KN83 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.63■□□□□ 0.89
SBNO1A3KN83 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SBNO1A3KN83 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SBNO1A3KN83 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SBNO1A3KN83 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SBNO1A3KN83 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SBNO1A3KN83 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
SBNO1A3KN83 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SBNO1A3KN83 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SBNO1A3KN83 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SBNO1A3KN83 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SBNO1A3KN83 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SBNO1A3KN83 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SBNO1A3KN83 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC20.62■□□□□ 0.89
SBNO1A3KN83 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC20.62■□□□□ 0.89
SBNO1A3KN83 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SBNO1A3KN83 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SBNO1A3KN83 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SBNO1A3KN83 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SBNO1A3KN83 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC20.62■□□□□ 0.89
SBNO1A3KN83 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SBNO1A3KN83 AC009779.1-201ENST00000551138 283 ntBASIC20.62■□□□□ 0.89
SBNO1A3KN83 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC20.62■□□□□ 0.89
SBNO1A3KN83 AC100827.2-201ENST00000563214 1194 ntBASIC20.62■□□□□ 0.89
SBNO1A3KN83 WDR7-208ENST00000589935 544 ntTSL 4 BASIC20.62■□□□□ 0.89
SBNO1A3KN83 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
SBNO1A3KN83 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SBNO1A3KN83 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SBNO1A3KN83 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SBNO1A3KN83 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SBNO1A3KN83 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SBNO1A3KN83 MVK-214ENST00000629016 1591 ntTSL 5 BASIC20.62■□□□□ 0.89
SBNO1A3KN83 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SBNO1A3KN83 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SBNO1A3KN83 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SBNO1A3KN83 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SBNO1A3KN83 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC20.62■□□□□ 0.89
SBNO1A3KN83 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SBNO1A3KN83 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SBNO1A3KN83 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC20.62■□□□□ 0.89
SBNO1A3KN83 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SBNO1A3KN83 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SBNO1A3KN83 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SBNO1A3KN83 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SBNO1A3KN83 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC20.61■□□□□ 0.89
SBNO1A3KN83 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SBNO1A3KN83 RBM38-204ENST00000371219 760 ntTSL 2 BASIC20.61■□□□□ 0.89
SBNO1A3KN83 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC20.61■□□□□ 0.89
SBNO1A3KN83 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SBNO1A3KN83 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC20.61■□□□□ 0.89
SBNO1A3KN83 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC20.61■□□□□ 0.89
SBNO1A3KN83 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SBNO1A3KN83 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SBNO1A3KN83 RCC2P8-201ENST00000502779 1035 ntBASIC20.61■□□□□ 0.89
SBNO1A3KN83 PGAM1P5-201ENST00000548011 764 ntBASIC20.61■□□□□ 0.89
SBNO1A3KN83 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC20.61■□□□□ 0.89
SBNO1A3KN83 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SBNO1A3KN83 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC20.61■□□□□ 0.89
SBNO1A3KN83 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC20.61■□□□□ 0.89
SBNO1A3KN83 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC20.61■□□□□ 0.89
SBNO1A3KN83 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC20.61■□□□□ 0.89
SBNO1A3KN83 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SBNO1A3KN83 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC20.61■□□□□ 0.89
SBNO1A3KN83 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC20.61■□□□□ 0.89
SBNO1A3KN83 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SBNO1A3KN83 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.61■□□□□ 0.89
SBNO1A3KN83 FKBP4P6-201ENST00000457486 1332 ntBASIC20.61■□□□□ 0.89
SBNO1A3KN83 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SBNO1A3KN83 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SBNO1A3KN83 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SBNO1A3KN83 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SBNO1A3KN83 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SBNO1A3KN83 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms