Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 AC023024.2-201ENST00000623561 1993 ntBASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 C8orf49-201ENST00000525043 1968 ntBASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 CICP11-201ENST00000434745 2827 ntBASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 AC236430.1-201ENST00000402231 743 ntBASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 AL132655.2-201ENST00000596276 594 ntBASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC196A0A1B0GTZ2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC196A0A1B0GTZ2 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CCDC196A0A1B0GTZ2 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC196A0A1B0GTZ2 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.02■□□□□ 0.48
CCDC196A0A1B0GTZ2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC196A0A1B0GTZ2 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.02■□□□□ 0.48
CCDC196A0A1B0GTZ2 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CCDC196A0A1B0GTZ2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC196A0A1B0GTZ2 MIR661-201ENST00000384842 89 ntBASIC18.02■□□□□ 0.48
CCDC196A0A1B0GTZ2 PIN1P1-201ENST00000412108 996 ntBASIC18.02■□□□□ 0.48
CCDC196A0A1B0GTZ2 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC196A0A1B0GTZ2 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.02■□□□□ 0.48
CCDC196A0A1B0GTZ2 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.02■□□□□ 0.48
CCDC196A0A1B0GTZ2 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC196A0A1B0GTZ2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CCDC196A0A1B0GTZ2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.02■□□□□ 0.48
CCDC196A0A1B0GTZ2 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.02■□□□□ 0.48
CCDC196A0A1B0GTZ2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC196A0A1B0GTZ2 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.02■□□□□ 0.48
CCDC196A0A1B0GTZ2 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC196A0A1B0GTZ2 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC196A0A1B0GTZ2 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.02■□□□□ 0.47
CCDC196A0A1B0GTZ2 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC196A0A1B0GTZ2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC196A0A1B0GTZ2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC196A0A1B0GTZ2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC196A0A1B0GTZ2 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC196A0A1B0GTZ2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC196A0A1B0GTZ2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC196A0A1B0GTZ2 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC196A0A1B0GTZ2 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC196A0A1B0GTZ2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
CCDC196A0A1B0GTZ2 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC196A0A1B0GTZ2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms