Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 AL133267.1-201ENST00000398220 340 ntBASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 AL512384.1-201ENST00000406683 331 ntBASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 AC015910.1-201ENST00000579400 975 ntBASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL4A3BPQ9Y5P4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 KRT18P43-201ENST00000469825 1281 ntBASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 AC132938.2-201ENST00000579188 680 ntBASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.34■□□□□ 0.37
COL4A3BPQ9Y5P4 AL591163.1-201ENST00000641757 987 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms