Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 AL122018.1-201ENST00000446607 2310 ntBASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 AC139530.3-201ENST00000620344 690 ntBASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 AC134684.3-201ENST00000641758 218 ntBASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
R3HCC1Q9Y3T6 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 AL135744.1-201ENST00000565098 629 ntBASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 AC099522.2-201ENST00000607001 744 ntBASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
R3HCC1Q9Y3T6 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
R3HCC1Q9Y3T6 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
R3HCC1Q9Y3T6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.88■□□□□ 0.45
R3HCC1Q9Y3T6 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
R3HCC1Q9Y3T6 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.88■□□□□ 0.45
R3HCC1Q9Y3T6 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
R3HCC1Q9Y3T6 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
R3HCC1Q9Y3T6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.88■□□□□ 0.45
R3HCC1Q9Y3T6 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
R3HCC1Q9Y3T6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.88■□□□□ 0.45
R3HCC1Q9Y3T6 FGD5P1-202ENST00000614866 2498 ntBASIC17.88■□□□□ 0.45
R3HCC1Q9Y3T6 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
R3HCC1Q9Y3T6 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms