Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 HLA-H-201ENST00000383620 1096 ntBASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 MIR1224-201ENST00000408193 85 ntBASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 AP001005.1-201ENST00000571755 1248 ntBASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 INTS4P1-203ENST00000641008 3683 ntBASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
UBE2D4Q9Y2X8 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 AC004870.1-201ENST00000315132 882 ntBASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 KRT18P56-201ENST00000507275 550 ntBASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 AL135744.1-201ENST00000565098 629 ntBASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 NAA38-207ENST00000576861 556 ntTSL 3 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms