Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 TARDBPP1-201ENST00000442013 1203 ntBASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 AC022210.1-201ENST00000449856 793 ntBASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 AC010319.3-201ENST00000597028 470 ntBASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 AL512343.1-201ENST00000605837 169 ntBASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 AL158212.4-201ENST00000624062 1286 ntBASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 RPS2P32-201ENST00000439199 892 ntBASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 EEF1DP4-201ENST00000446006 880 ntBASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 AC008735.3-201ENST00000596646 500 ntBASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPA1Q9UND3 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA1Q9UND3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA1Q9UND3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA1Q9UND3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA1Q9UND3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA1Q9UND3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPA1Q9UND3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
NPIPA1Q9UND3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms