Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.05■□□□□ -0
CPNE7Q9UBL6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CPNE7Q9UBL6 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.05■□□□□ -0
CPNE7Q9UBL6 AC084364.1-201ENST00000551967 1556 ntBASIC15.05■□□□□ -0
CPNE7Q9UBL6 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.05■□□□□ -0
CPNE7Q9UBL6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CPNE7Q9UBL6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE7Q9UBL6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE7Q9UBL6 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.05■□□□□ -0
CPNE7Q9UBL6 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE7Q9UBL6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CPNE7Q9UBL6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE7Q9UBL6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE7Q9UBL6 AL365203.3-201ENST00000609742 2057 ntBASIC15.05■□□□□ -0
CPNE7Q9UBL6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE7Q9UBL6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
CPNE7Q9UBL6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.05■□□□□ -0
CPNE7Q9UBL6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CPNE7Q9UBL6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.05■□□□□ -0
CPNE7Q9UBL6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE7Q9UBL6 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CPNE7Q9UBL6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE7Q9UBL6 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CPNE7Q9UBL6 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.05■□□□□ -0
CPNE7Q9UBL6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE7Q9UBL6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.04■□□□□ -0
CPNE7Q9UBL6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.04■□□□□ -0
CPNE7Q9UBL6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.04■□□□□ -0
CPNE7Q9UBL6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE7Q9UBL6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE7Q9UBL6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE7Q9UBL6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE7Q9UBL6 MSTO2P-201ENST00000314835 1709 ntBASIC15.04■□□□□ -0
CPNE7Q9UBL6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE7Q9UBL6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE7Q9UBL6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE7Q9UBL6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE7Q9UBL6 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE7Q9UBL6 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE7Q9UBL6 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE7Q9UBL6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE7Q9UBL6 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.04■□□□□ -0
CPNE7Q9UBL6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE7Q9UBL6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE7Q9UBL6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE7Q9UBL6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE7Q9UBL6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CPNE7Q9UBL6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CPNE7Q9UBL6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.03■□□□□ -0
CPNE7Q9UBL6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.03■□□□□ -0
CPNE7Q9UBL6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.03■□□□□ -0
CPNE7Q9UBL6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.03■□□□□ -0
CPNE7Q9UBL6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
CPNE7Q9UBL6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.03■□□□□ -0
CPNE7Q9UBL6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.03■□□□□ -0
CPNE7Q9UBL6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.03■□□□□ -0
CPNE7Q9UBL6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.03■□□□□ -0
CPNE7Q9UBL6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.03■□□□□ -0
CPNE7Q9UBL6 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms